Candidatus Westeberhardia cardiocondylae: WEOB_338
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Entry
WEOB_338 CDS
T09022
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
wca
Candidatus Westeberhardia cardiocondylae
Pathway
wca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
wca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
WEOB_338 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wca03019
]
WEOB_338 (orn)
03009 Ribosome biogenesis [BR:
wca03009
]
WEOB_338 (orn)
Messenger RNA biogenesis [BR:
wca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WEOB_338 (orn)
Ribosome biogenesis [BR:
wca03009
]
Eukaryotic type
Pre-60S particles
RNases
WEOB_338 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CEN32272
UniProt:
A0A0H5BX14
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All DBs
Position
I:complement(420525..421070)
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AA seq
181 aa
AA seq
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MSFSANNLIWIDLEMTGLNPEQDRIIEIATLVTDSNLNILSEGPVLAIHQSDEQLSLMDK
WNIRVHTSSGLIDRVKVSCIDEELAVLKTLSFLSEWVPCGKSPICGNTVAQDRRFLFRYM
PSLEAYFHYHYLDVSSVKELVRRWKPEILLGLKKRNTHKALLDIRESVEEMLYYREHFIR
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttagtgctaataatttaatttggattgatttggagatgactggattaaatcct
gaacaagatcgtattattgagattgcaactttagttactgattctaatttaaacatttta
tcagagggtcccgttttagcaatacatcagtctgacgaacaattatctctgatggataaa
tggaatattcgcgtccatacgtccagtggtttaattgatagagttaaggttagttgtatt
gatgaagaattagcggttttaaaaacattgtcatttttatctgaatgggtcccttgtgga
aaatccccgatttgtggtaatactgttgctcaagatcgtaggtttttatttcgatatatg
ccatctttggaagcatattttcattatcattatttagatgtttcttctgttaaggaattg
gttcgaagatggaaacctgagattttattgggattaaagaaaagaaatactcataaagct
ttgttagatattcgtgagtcagtggaagaaatgttatattatcgagagcattttattcgt
ttgtaa
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