Candidatus Westeberhardia cardiocondylae: WEOB_362
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Entry
WEOB_362 CDS
T09022
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wca
Candidatus Westeberhardia cardiocondylae
Pathway
wca03030
DNA replication
wca03430
Mismatch repair
wca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WEOB_362 (dnaE)
03430 Mismatch repair
WEOB_362 (dnaE)
03440 Homologous recombination
WEOB_362 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wca03032
]
WEOB_362 (dnaE)
03400 DNA repair and recombination proteins [BR:
wca03400
]
WEOB_362 (dnaE)
Enzymes [BR:
wca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WEOB_362 (dnaE)
DNA replication proteins [BR:
wca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WEOB_362 (dnaE)
DNA repair and recombination proteins [BR:
wca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WEOB_362 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
CATSPERE_Ig-like
Motif
Other DBs
NCBI-ProteinID:
CEN32293
UniProt:
A0A0H5BX62
LinkDB
All DBs
Position
I:448069..451593
Genome browser
AA seq
1174 aa
AA seq
DB search
MITPKFIHLRMHSDYSIKDGLIKLNSLIKKTKELKMPAIALTDNMNLFGLIKFYNISFKK
GIKPIIGSDITLKTNEIIPEFTKITALAANNIGYKNLIQLLTISYKHGYNPTIGPFIDIK
HLTKYNEGIILLSGGIKGDIGNCIIKNNLSKIEKYIIFYKKYFFNRYYLELTRTGRPYEE
YYIKSAIQLAIFNELPVVATNDVLFLTKEDFYAHEIRVAIHEGYKINNKTNKQKLYSPQQ
YMRNEQEMCELFSDIPEALTNSVKIAERCNVTIHFDKYTFPKFPKKNLSNKNYLIKLAKD
GLKTKLNFLYPNKNTRKKKFPIYEKRLKNELQTIGNMNLSSYFLIVMEFIQWAKNNNIPV
GPGRGSGAGSLVAYVLKITELDPLLFNLLFERFLNPERTSQPDLDIDFCMKKRDLVIKHV
IDSYGKDSVSQIITFGTMTAKAVIRDVGRALGYPYNFVDHIAKLIPFDPKITIKKSFIIN
PILKKKYETDQEIQTLINMAIKLEGTIRNVGKHAGGIVITPKNITNFSPLYCDFSGENIV
TQFDKYDIEKLGLIKFDFLGLRTLTIIDKTLKMINKHRKEKKLHLIKINEIPTNDKESFK
KLQKSETTAIFQLESNGIKNLIKRLKPDCFEDIIALIALFRPGPIKSGMINNFINRKNGR
ETISYLDPKLTKNKLLQKILKPTYGIILYQEQVMQIAQTLAGYTLKNADILRCAMTKKEP
KEMIKQQLLFNKGTKKNKIDYELSKKIFNILEKFSGYSFNKSHAAAYALLTYQTLWLKTH
YPAEFMAATMNADIDNTEKITNWINECARMKIKVLKPDINNSQYHFYVDKNENIVYGMGA
IKGIGKKTVKTIINTRNKNGNFHNLFDFFLKHNTNIINKRTLEKLAMSGSLDVFGIHRAA
LIESIKKIINVNNQYEINKKFGQMDMFETASKTISRILQNNNEIITPWSKQITLDNEQKT
LGIYLSGNPITQFLKEITFYNIQYTLIKYIKFKIDNINKIITTIGIVTNIKLIHNKQSKN
IGIITISDESKKLLNIILIDKILEKNQYMLKKNSILMIQGKIVFNNFSKKYTIIATTIMN
IIKIREKYIHKIAILLTEKQINHKFLNNLEKVLKNYQPGKIPIYLFHKKENKQKSYLNIC
SKITPSDSLFNKLNMLVGKNKIKLKFQRIVKDIL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattaccccaaaatttattcatttacgtatgcatagtgattattcaataaaagatgga
ttaattaaacttaattcattaataaaaaaaactaaagaacttaaaatgccagctattgca
ttaacagacaatatgaatttatttggattaattaaattctataatatctctttcaaaaaa
ggaataaaaccaatcataggatcagacattactttaaaaactaacgaaataataccagaa
ttcacaaaaataactgctttagcagccaataatattggatataaaaatttgattcaatta
ttaacaatttcttacaaacacggttataatccaactattggaccttttattgatataaaa
catcttacaaaatataatgaaggaattatcttattatctggagggataaaaggagacata
ggaaactgcataataaaaaacaacttatcgaaaatagaaaaatacataattttttacaaa
aaatactttttcaatcgatattaccttgaattaactagaacaggtagaccatacgaagaa
tattatataaaatctgcaatacaacttgctatatttaatgaacttccagtagtcgctact
aatgacgtattatttttaacaaaagaagacttttatgcacacgaaattcgtgttgcaatt
cacgaaggatacaaaataaacaataaaacaaataaacaaaaactttatagtcctcaacaa
tatatgcgaaatgaacaagaaatgtgtgaattattttctgatataccagaagcgttaact
aacagtgtaaaaatagctgaaagatgcaatgttactatccattttgataaatatactttt
ccaaaatttcctaaaaaaaacctttcaaacaaaaactatttaattaaacttgcaaaagac
ggtttaaaaacaaaattaaattttctttatccaaacaaaaacacaagaaaaaaaaaattt
cctatctatgaaaaacgtttaaaaaatgaattgcaaaccattggaaatatgaatttatct
agttatttcctcatagtgatggagtttatacaatgggctaaaaacaataatattccagtt
ggaccaggaagaggatcaggagctggatcattagttgcgtacgtattaaaaatcactgaa
ttagatccattattattcaacttattattcgaacgatttttaaatcctgaaagaacatca
caacctgatttagacattgatttttgcatgaaaaaaagagatttagtaattaaacatgta
attgattcttacggaaaagactcagtatcacaaatcattacttttggaacaatgactgca
aaagcagtaattcgcgatgtaggaagggcattagggtatccatataattttgtggatcat
attgcaaaactaataccatttgaccctaaaataacaataaaaaaatcattcataataaat
ccaatcttaaagaaaaaatatgaaactgaccaagaaatacaaacattaattaatatggca
ataaaattagaaggaactataagaaatgtaggaaaacatgccggaggaattgtaataact
cctaaaaatatcactaatttttcaccattatattgtgatttttccggagaaaatattgta
actcaatttgataaatatgacattgaaaaacttggtttaataaaatttgattttttagga
ttacgaactttaaccattatagataaaacattaaaaatgatcaataaacatcgaaaagaa
aaaaaattacatttaataaaaattaatgaaattcctacaaatgataaagaaagtttcaaa
aaactacaaaaatcagaaacaactgcaatattccaattagaatcaaacggaataaaaaac
ttaatcaaaagactaaaaccagattgttttgaagacattattgcgctaatagcattattc
agaccaggtccaataaaatcaggtatgataaataattttataaatcgaaaaaatggacgt
gaaactatttcatacttagatccaaaactaacaaaaaataaattactacaaaaaatccta
aaacccacttacggtataatattatatcaagaacaagtcatgcaaatagcccaaacatta
gcaggttatacacttaaaaacgcagatatattacgttgtgctatgacaaaaaaagaacca
aaagaaatgataaaacaacaattattattcaataaaggaacaaaaaaaaacaaaattgac
tatgaattatcaaaaaaaattttcaatatattagaaaaattttctggttatagttttaat
aaatctcatgctgcagcttatgcgttattaacatatcaaactctttggttaaaaacacat
tatcctgcagaattcatggctgcaacaatgaatgctgatatagataatacagaaaaaata
acaaattggatcaatgaatgtgcacgtatgaaaataaaagttttaaaaccagatattaat
aatagccaatatcatttttatgtagataaaaatgaaaatatagtctacggaatgggagcg
ataaaagggattggtaaaaaaacagttaaaacaattattaatacaagaaacaaaaatgga
aattttcataatttatttgatttttttttgaaacataatactaatataattaataaaaga
acactagaaaaattagctatgtctggttcccttgatgtatttggaatacatcgagcagca
ctaatagaatcaattaaaaaaatcataaatgtaaacaaccaatacgaaataaacaaaaaa
ttcggacaaatggatatgtttgaaaccgcttcaaaaacaatatcaagaatattacaaaat
aataatgaaataattaccccttggtccaaacaaattactctagataacgaacaaaaaact
ttaggaatttatctaagtggaaatccaatcacacaatttttaaaagaaatcacattttac
aatatacaatacacattaataaaatatattaaatttaaaatcgataatataaataaaata
ataactactattggtatagttactaatattaaactaatacataataaacaaagtaaaaat
attggtattataacaattagtgatgaatcaaaaaaactattaaacataatattgattgat
aaaattttagaaaaaaaccaatatatgctaaaaaaaaattcaattctaatgattcaagga
aaaatagtatttaacaattttagtaaaaaatatacaatcatcgctacaactataatgaac
attatcaaaatcagagaaaaatatatacataaaatagcaattttattaaccgaaaagcaa
ataaatcataaatttttaaataatcttgaaaaagtactaaaaaactatcaaccaggaaaa
attccaatatatctattccataaaaaagaaaacaaacaaaaatcatatttaaatatatgt
tcaaaaattacaccaagcgattctttatttaataaattaaatatgcttgtaggaaaaaac
aaaataaaattaaaatttcaaagaattgttaaagatattttatga
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