Weissella cibaria: AO080_00575
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Entry
AO080_00575 CDS
T04106
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcb
Weissella cibaria
Pathway
wcb03420
Nucleotide excision repair
wcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO080_00575
03430 Mismatch repair
AO080_00575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_00575
Enzymes [BR:
wcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO080_00575
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO080_00575
MMR (mismatch excision repair)
Other MMR factors
AO080_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_30
DEAD
SLFN-g3_helicase
NACHT
AAA_16
Phenol_MetA_deg
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
ALI32053
LinkDB
All DBs
Position
complement(115345..117645)
Genome browser
AA seq
766 aa
AA seq
DB search
MHADQPVEQERLDKVVVEIDQQLENAKDAYAQAHSETRAVEGNYIANTSINTFEVDDAME
TNAEIQQQRNIVARVTETENIMRKTVDTLTMLRPSPYFGRVDIDEEGDQESLYIGLASVQ
DKSGDFLVYDWRAPISGIYYNGTLGKVSYPTPMGEQDAELLKKRQFTIADAKIVNMFDTN
ETVGDEMLQYALGQQNDLTMRNIVATIQQEQNQIIRDTTSDLLVVQGVAGSGKTSAILQR
IAFLLFHAREELNSDQIVLFSPNRLFSSYIADVLPSLGERNMRQVTLAEFFSARLQGLQV
QTLFERYETGQNTVSDVSLQVREVLEDATILDALTAFVEQLTPTTLRFDNIYFEDDVFFS
KEAMTLLFAEFSSNYSVRERIQMTQKRLMERLNNRIDALVDEDWVLEALNNLDDQQYRDL
LGDELAEQVAEEEEMGDAIDVAAKRYLEREFQVVDDALYNMHFFDIYNQYGDFLAYMANQ
RPAEAEWWLSKRDRFLRELEYHRIDLEDAAPMLFLRDLITGGGTNKSMFYVFVDEMQDYT
MAQLLYLKHAFPAAKFTVLGDAEQALFREVETPAALLAKYTAAFKATKPNLITLNKAYRS
TQEIMDFAKALLPDGDNIMAFTRPGGKPALYITDTTGVADELWRQVDALRQDHNTVAILT
KTQPEAEAVYRMLRKYPEKFQLLQASDRTRTSNLVVMPIYLAKGLEFDAVIGYDVSQTNY
PDSEATGLLYTLASRAMHALTLISVGPVSSLIRQVQDTLEIHAFGE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcagatcaaccagtagaacaagaacgactagacaaagtggttgttgaaattgat
cagcagttggaaaatgcgaaggacgcatacgcacaagctcattctgaaacacgcgccgtt
gaaggtaattacatcgccaatacgtcaattaacacgtttgaagtcgatgatgccatggaa
acgaatgccgaaattcagcagcaacgaaacattgtggcccgtgtaacggaaactgaaaat
atcatgcgtaagacggtggataccttaacaatgttgcgaccaagcccctattttggacgc
gtcgatattgatgaagaaggtgaccaagagtcgttgtacattggcttggcctcggttcag
gataaaagtggtgatttcttagtgtacgattggcgggctccgattagtggtatttactat
aacggaacgctgggtaaggtatcatatccgaccccaatgggagagcaagatgctgaatta
ttgaagaagcgtcaattcaccattgcagatgccaaaattgttaatatgtttgatacgaat
gaaaccgtgggcgatgaaatgttgcagtatgcgctggggcaacaaaatgacctgacgatg
cgcaatatcgtggctacaattcaacaagagcaaaatcaaattattcgagacacaacaagt
gacttgctggtggtgcaaggtgtggcaggttccggtaaaacgtcggcgattttgcaacgt
attgcctttttgctattccatgcccgtgaagaacttaattcggatcaaattgtcttgttc
tcacctaatcggttgttctcaagttatattgccgatgtcctgccatcacttggtgagcgc
aatatgcggcaggtgacgctggctgagtttttcagcgcacgtttacaaggattgcaagta
caaacgttgttcgaacggtacgagacaggacaaaacacagttagtgatgtaagtctgcag
gtacgggaagtgcttgaggacgcaacgattttagatgcgctgacggcctttgttgagcag
ctaacgcctacaacgctacgctttgacaatatctattttgaagatgatgtctttttcagc
aaggaagcgatgacgttattgtttgctgaattctcaagcaactattcagtacgcgagcgg
attcaaatgactcaaaagcgtttgatggaacgtttgaataaccggattgacgctttggtt
gatgaagactgggtgctagaagcactgaataatttggatgaccaacaataccgtgactta
ttaggtgatgaactcgccgagcaagttgcggaagaagaagaaatgggtgatgcgattgat
gtggctgcgaagcgctacctcgagcgagaattccaagtggttgatgatgcactatacaat
atgcacttctttgatatctataaccaatacggagatttcctagcttacatggcaaatcaa
cgaccagcggaagcagagtggtggctatcaaagcgcgatcgctttttacgcgagctagag
tatcaccgaatcgatttagaagatgcagcaccaatgctctttttgcgtgatttgattacg
ggtggtggtacgaataagtcgatgttttacgtctttgttgatgaaatgcaagactatacc
atggcacaattgttgtatttgaagcatgctttcccagctgctaaatttacggtgttgggg
gatgctgaacaagcactcttccgtgaagttgagacgcccgcagcgttgttggccaagtat
acagccgcatttaaagcgactaagcctaatttaattacgttgaataaggcttaccgatca
acgcaagaaatcatggattttgcgaaagcactcttgccagatggtgacaacatcatggcg
tttacgcgtcctggtggcaaaccagccctttatatcaccgacacaaccggcgtcgctgat
gaattatggcgtcaagttgatgcgttacgccaagatcataacaccgttgctattttgaca
aagacacaaccggaagcggaagcggtgtaccggatgctacgcaagtatcctgaaaaattc
caattattgcaggccagtgatcggacacgaacgtctaacttagtcgtgatgccaatatac
ttagccaaaggactagaatttgatgcagtgattggttatgatgtgtcacaaacgaactat
cctgattctgaagcaacgggcttactttatacgctagcatcccgggctatgcacgctttg
acgctcattagcgttggcccagtatcgagtttaattcgccaggtgcaagacaccttagaa
attcatgcctttggtgaataa
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