Weissella cibaria: AO080_00795
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Entry
AO080_00795 CDS
T04106
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
wcb
Weissella cibaria
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_00795
Enzymes [BR:
wcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO080_00795
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AO080_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_12
Taeniidae_ag
ResIII
AAA_16
Flavi_DEAD
AAA_30
Porin_1
Motif
Other DBs
NCBI-ProteinID:
ALI32091
UniProt:
A0A0N9XWE1
LinkDB
All DBs
Position
complement(164802..168587)
Genome browser
AA seq
1261 aa
AA seq
DB search
MNFTASQEAAITARGENILVSASAGSGKTRVLVERVTRRLLAGENVNEFLIVTFTEAAAA
EMKERLEGAIRSALAESEGTQRQHLLKQLRLLNVANISTLHAFALRLIEQYHYTIDLDPQ
FRLSDDAERTLLMMEVYGDLLEARYANDKDQAFARFASQFASGSTDDRTLQEAVFTLFNF
AMARPDTTAWLEGLAAQYEIAGSLTETPFYQAQMLPIMTSELQTLVTQAEQLLNQAPDTM
DEAPALNRLLNLQTDTDTYHRLLQVVQDPTVSWDDMRQAFLSADVMGWGTGADGKRKNFT
AKHDPELKAAWELVKTQRERIKERLEALQTGFFALDEAAMQLAVRGAGEVITELVAFTQD
FREAFLAEKLRRKVLDFNDLEHFALQIVSQPAVQTELRARYNEVMVDEYQDTNQLQEAIL
SFIASGDNTFQVGDIKQSIYKFRQADPTLFGHKLATYPQTPGNKVITLQENFRSQPNVTN
FINFIFAQIMSDGLGDVDYTGEAELVAGADYYPADLPKEAELMVYLDDGTTTDDADDGPE
VANEFGFTKATGQIRMMALKIRELIDTKFEIFDRKAGEKRPVTYSDMTVLVPTKNQNLDV
LDVFREMDIPIVVNGAESYFQTTEISVMMSLLQVIDNPHQDIPLAAVLRSPLYNVDENGL
ALIRTQAMTEDFYTAVQALANNALTIAVAGVSETQVNETIAAVQRFLADLESFRTLAVQN
QIVDLLWQIYNTTGWLDYVGGLPSGPQRQANLHALYERAAAYQKSSFVGLYRFINYVTQL
QSQDKDLGEADANVASDSVSLMTIHHSKGLEFPIVFVLNSTRRMISQRETMGDILLDAEA
GAGMDYIDLDHHLKLPTPQREFVKQARVRGAFAEQLRVLYVALTRAEQHLFMVGAYDSVK
ALWDKWSLAEAGTEWMLPEWARLEGKSFMDLMGMALMRHPKAPELASVLTAYDDKDVIDF
SEIRTKAPKQPFNFGLEIVNGADLRALVDAYQAMPLSEATAEKTGATPDGIINDWRSVLQ
FDYQFDEATRATAYQSVSEIKRLFEDPDLAAGRGLVDGRIQADEFAGLRFTDETLPEPTF
MQEAETRISSAAIGTATHLVMQRVDLSTGAPTQADLRALVADLVDQELIEDKVAHLISLS
KIERFFTNSPLGKQMVAHADSLQREVQFSLLLDADRLYKDFQGSEKVLIHGIIDGYFQVD
DEVWLFDYKTDRVTPETAAETLTQRYSGQLNVYAQALVAMGKPMPRRFIYAFSAEKIIAL
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacagcatcacaagaagcggccattacagcccgcggtgaaaatattttggtg
tctgcctcggcagggtctggtaagacccgcgtgttggttgaacgtgtgacccgtcgtttg
ttagccggtgaaaatgtaaatgagtttttgattgtgacgtttactgaagcggccgctgca
gaaatgaaagaacgactcgaaggtgcaattcgtagtgccttagctgagtcggagggcacc
caacgacaacacctgttgaagcaattgcgattgttaaacgtcgccaacatttcaacattg
cacgcgtttgctttgcggttgattgaacaatatcactacactatcgatttggacccccag
ttccgtctatctgatgatgccgaacggacgttgttgatgatggaagtctatggcgatcta
ttagaggcgcgctatgctaatgataaagaccaagcgtttgcccgttttgcttcgcaattc
gcttcagggtcgacagacgaccggacgttgcaagaggcggtgtttacgctgttcaacttt
gcaatggcgcgaccagacacgacagcgtggttagaaggcttagctgcacaatacgaaatt
gcagggtcgttgactgagacgccgttttatcaagcgcagatgttaccaattatgacgtct
gaattgcagacgttagtgacacaagctgaacaattattgaaccaagcacccgatacgatg
gatgaagcgcctgctttgaaccggttattaaatttacagacggatactgatacctaccac
cggttattgcaagtcgtccaggatccaaccgtcagttgggacgatatgcgccaggccttt
ttgtcagccgatgtgatgggctgggggaccggcgcagacggcaaacgcaagaattttacc
gccaagcatgaccctgaactaaaagccgcctgggaactggtgaagacccagcgtgaacgg
attaaggaacggttggaagcattacaaacgggcttttttgccttggatgaagcggccatg
caattagctgtgcgtggggccggtgaggtgattaccgaattagtcgcatttacgcaagac
tttcgagaggcctttttagcagaaaagttacgccgtaaggttctggactttaacgatttg
gaacactttgcgcttcaaattgtcagccagccggcagtgcagactgagttgcgcgcacgt
tataacgaagtgatggttgatgagtatcaagacacgaatcaactacaagaagcgatttta
agtttcattgcgagcggtgataatacgttccaagtgggtgatattaaacagtcgatttat
aagttccgtcaggcggacccaacgttgtttggtcataaacttgcgacgtatccacaaacg
ccaggcaataaggtgattacactgcaagaaaacttccgttcacaaccgaacgtcacgaat
ttcatcaactttatttttgcgcaaattatgagcgacgggttaggcgatgttgactatacg
ggcgaagcagaattggtcgccggggctgattattatccggccgacttgcctaaagaagca
gaattgatggtgtacctagatgatgggacaacaacagatgacgctgatgacggtccagag
gtcgcaaatgagtttggctttacaaaagcaacgggtcaaattcggatgatggctttgaaa
attagggagttaatcgacaccaagtttgaaatatttgatcgtaaagccggtgaaaagcgt
ccggtgacatacagcgatatgacggttttggtgccaactaagaatcaaaatttggatgtc
ttggatgtgtttcgtgaaatggacattcctatcgttgttaacggggcggagagttatttc
caaacaaccgaaatttcagtcatgatgagcttgttgcaggtgattgataacccacaccaa
gatattccgttggcagcagtattgcgttcgccactgtataacgttgatgaaaatggctta
gcgttaattcgaacgcaagccatgacggaagatttttatacggcggttcaagccttagcg
aataatgcgttaacaattgccgttgccggcgtttctgagacacaggtcaatgagacaatc
gcggcggtgcagcgtttcctagcggatttggagagtttccggacgttggctgttcaaaac
caaattgtggatttgctgtggcagatttataatacaacggggtggctggattacgtcggt
gggttgccatctggtccgcaacggcaagccaatctgcatgcgttgtatgaacgggcagct
gcttaccaaaagagtagtttcgttggtttgtatcggtttattaattatgtgacgcagcta
caaagtcaggacaaagaccttggtgaagcggatgcgaatgtggcgagtgatagcgtctca
ttgatgacgattcaccactcgaaagggctggagttcccgattgtgtttgtcctgaatagt
acccggcgcatgattagtcagcgagaaacgatgggtgacattctgcttgatgctgaagcc
ggggccgggatggattacattgatttggatcaccacctcaagttaccaacgccacaacgt
gaatttgttaaacaagcgcgcgttcgtggtgcgttcgccgaacaattgcgggtgctctat
gttgcgttaacgcgtgctgaacaacacttgtttatggtgggggcgtatgacagtgtgaaa
gccctatgggataagtggtcgttagctgaagccggcacggaatggatgttgccagagtgg
gcccgccttgaaggaaagtcattcatggacttaatggggatggccttgatgcgccatccc
aaggcacctgaattggcaagcgtgctgacagcttacgatgataaggatgtcattgatttc
agtgagattcggacgaaagcgccgaagcaaccgttcaattttggtctagaaatcgtgaat
ggggccgatttacgcgcgctggttgatgcttatcaagcgatgccattgtctgaagcgacg
gcagaaaagaccggtgccacgccggacggcatcatcaatgattggcgttcggtgttgcaa
tttgattatcagtttgatgaggcgacgcgtgccacagcgtaccagtcagtttcagaaatt
aaacgtctatttgaagatccagatttagcagctggccgtggcttagtggatgggcgtatt
caagcggatgaatttgcagggttacggtttacggatgaaacgttaccagaaccgaccttt
atgcaagaagcagaaacgcgtatttcatcggctgcgattggaacggcaacgcacttggtt
atgcaacgtgttgatctatcgacaggagcgccaactcaggctgacttgcgcgcgctggtg
gccgatttggttgaccaagagttaatcgaggataaggtggcccatctgatttcgttatct
aagattgaacgtttcttcacgaattcacctttgggcaagcaaatggttgcccatgcggac
tctttacaacgtgaagtgcagttctcacttttgcttgatgcagatcgtctgtacaaagac
ttccagggatcagaaaaagttttgattcacggtattattgatggctatttccaggtcgat
gatgaggtgtggttgttcgattacaagactgatcgggtaacacctgaaacggcagctgaa
acccttacgcaacgttattcaggtcaattgaacgtttatgcacaggcgctggtggcaatg
gggaagccaatgccacgtcggtttatttatgcctttagtgcagagaaaattattgcatta
gactaa
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