Weissella cibaria: AO080_00800
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Entry
AO080_00800 CDS
T04106
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
wcb
Weissella cibaria
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_00800
Enzymes [BR:
wcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO080_00800
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AO080_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALI32092
LinkDB
All DBs
Position
complement(168591..172139)
Genome browser
AA seq
1182 aa
AA seq
DB search
MALELLFGRASSDHELALLERVQATLAADDQAEIFYVVPNHIKFETEIQVLNRLATLQDR
HGAAVAVPNVQVFSLSRLAWYYMQNDPIYRQANLSATGMTMLVQSLLRDHQTELELYGNL
LTKQGFISQFASQILELKQAGLSWQEVRDMADALTQQGTLQMKLHDLALIGEALDQELAT
RNQYLSSQLLAALRVYLATEKTDVSHHYYFINGYSQMTTPERGVVEALIERAGGVTIALP
ADDGSASVTSESLSENDLFYRPKRLAQQLRQFATDHQVAVTASSVTVQRPVSETITTVES
FWIAYEQEGVKPNGQTPTPKDLAIWQATTRYQEIEQMARMIRQEVASGKRRYRDFMLMTR
DLGQYENMLPAVFARYQIPVFMDLDRPMAAHPLVAFLDKLFRLAPAYTLADVMGLLKTEL
LIPEDVTVAEYREALAETENYVLAKNTPGWRWTDKQPWQFDRNVADSDDEVLREHVAEKD
AQLALIHDQISTVVAPFLADLAQAPDAREMARRLYLFLTEIGMQQRLLAWRDEAIAQGDL
WTAQQPEQVWRTFIGVLDDFVAVFDHTPMTIAELQELLKAAFDSAKYTGIPATMDQVRVS
ESGIVQRQGYHTVIVFGATSVNLPATTRTKALLHDGDREILQDRLPEHAFLRETSEQQMA
QESLLMYSAMMTAANRLIWLYATSDGEGSQQPSTYVTRLMKQFNVPVRHFAALPDPNTMR
IGDYVGTVDSTLAHLVSVNRQAANQQPAGTLSSAWQTLQQQVSQMAPDKTARVMGGLTYR
NEPQQILASLMSQLFSNDLKVSISRLENYAKNPFEFFLQYGLRLKERQVLQLTPAEKGTL
MHTILEQLFAELIRQDKTLSELTDIELENLERNILNGLLRSGDATFDIFSSSARMTFLTQ
RLAAQVHDTVLNMKRGQLVDGGVHTLGVEAGFGLPQSKLKPVQYELPLGKVTVRGKVDRY
DLVETPTGNFLTIVDYKSGKRTFDYTQAFAGLELQLMTYWTAMLANATVLPPSEMGGAVF
WSLQNPWIKVKDIAGDTLADLQTQADVAATNQGTYRGVLRNDEAYIERLEGVDGVKAPFA
IKRNKNGSFAKAADVVDEADLDILLAFNEAKIRQIASQILAGQFPLLPFRDGPNKTGMMY
TPFKPVMMFDAMMGNQYRNIKKLDAKDALAAMQSVITNEEDD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgaattattgtttggtcgggcaagctcagaccatgaattggcgttgctcgaa
cgtgtccaagctacgttagcagctgatgatcaagcggaaatcttttatgtggtccctaac
cacattaagtttgaaacggaaattcaggttttgaaccgactagcaaccttacaggatcgg
catggcgcagcggttgccgtgccaaatgtgcaggttttctcactgagtcgtttagcatgg
tactacatgcaaaatgaccccatctatcggcaagctaatttgtcagcgacgggaatgaca
atgttggtgcaatcactgttacgggaccatcaaacggagcttgaattgtacggtaattta
ttgacgaagcaaggttttattagccagtttgcgagtcaaattttggagcttaagcaagcc
ggtttgtcgtggcaagaagttcgtgacatggcagatgccttaacgcaacaagggacactg
caaatgaagctccatgatttagctttaattggtgaagccttagaccaagaattagctacg
cgcaatcagtatttgagtagtcaattattggcagccttgcgggtttatttagcaactgag
aaaacggatgtctcacaccactactatttcatcaatggttattcccaaatgacgactcca
gagcgcggtgtggttgaagcgttaatcgaacgggccgggggcgtcacaattgccttgcca
gctgatgatggttcggccagtgtgacgtcagagagtttgtcagaaaatgatttgttttac
cgtcccaagcgcttagcacaacaattgcgtcaatttgcgactgaccatcaagtggcggtg
acggcaagcagtgtgactgtgcaacgaccagtcagtgagacaattacgacggttgaatca
ttttggattgcttatgaacaagaaggcgtgaaacccaacggccagacaccaaccccaaag
gatttggcgatttggcaggcgacgacgcgctatcaagagattgaacagatggcccgcatg
attcgtcaagaagtggctagtggcaagcgacgctaccgggacttcatgttaatgacccga
gatttaggtcagtatgaaaacatgttgccggcggtttttgcgcgctatcaaattccggtc
ttcatggatttggaccgtccaatggcggcgcatcccctagtggcctttcttgataaactc
ttccgcttagcaccggcgtataccctcgcagatgtcatgggcctgttgaaaacggaatta
ctgattccagaagatgtgaccgtcgctgagtaccgggaagcgttggcggaaaccgaaaat
tacgtcttagctaaaaataccccaggatggcgctggacagataagcagccctggcaattc
gatcgtaacgtcgccgattcagatgatgaagtcttgcgagaacacgttgcggaaaaggat
gcgcaattggcactgattcatgatcaaattagcaccgttgtggcaccatttttggcagat
ttggcccaggccccagatgcgcgcgagatggcccgacgcctctacctgtttctaacagaa
attggcatgcaacaacgtttgctagcatggcgcgatgaggcgattgcccagggagacttg
tggacagcacagcaacccgaacaagtttggcggacctttattggcgtgctggacgatttt
gtcgcggtctttgatcatacgccgatgacgattgcagagctacaagaattgctgaaggcg
gcctttgatagtgccaagtacacgggtattccagctacgatggatcaagtccgtgtgtcg
gaaagcgggattgtgcagcgccaaggttatcatacggtgattgtttttggtgccacaagt
gtgaatttaccagccacgacacgtacaaaagcattgttgcatgatggtgaccgggaaatc
ttgcaggatcggttgcccgagcacgcgttcctgcgtgaaacatcggaacagcaaatggca
caagaatcgttgctgatgtacagtgcgatgatgacggctgctaatcgtctgatttggctc
tatgcaactagtgatggcgaagggagccaacaaccatcaacgtatgtcacgcgattgatg
aaacaatttaacgtgccggtccgtcactttgcggcgttaccagatccgaatacgatgcgc
attggcgattatgtcggtacggttgatagtacattagcgcacttagtcagcgtgaatcgc
caagcagccaatcagcaacccgccggtactttgagtagcgcgtggcaaaccttgcaacaa
caagttagccaaatggcaccagataagacggcacgggtgatgggtggactaacgtatcgt
aatgagccacaacaaatcttggcatcactgatgagtcaattatttagtaatgatttgaag
gtgtcgatttcacgcctagaaaattatgccaagaacccctttgagttcttcctgcagtac
ggcttacgtcttaaggagcgccaggttttgcagctaacgccggctgaaaaggggacgttg
atgcacacgattctagagcagttgtttgctgaattgattcgtcaagacaaaacgttaagt
gagttaacggatatcgagctagaaaacctggaacgcaatatcttgaacggcttgctacgc
agtggggatgctacgtttgatatcttcagcagttctgcgcgaatgacgtttttgacacaa
cgtttggctgctcaagttcatgatacggtgctcaatatgaaacgtgggcaactggtcgat
ggcggtgttcatacgttaggtgttgaggcgggctttggcttaccacagagtaagctcaag
ccagttcagtacgaattacccttaggtaaggtgacggtccgcggtaaggttgatcggtat
gatttggtcgaaaccccaactggcaattttttgacgattgttgattataagtcgggtaag
cggacgtttgattatacccaggccttcgccgggttggagttgcaattaatgacttattgg
acggccatgctagcgaatgcgacggtattaccgccaagtgagatgggcggggctgtcttc
tggtcactccaaaatccgtggattaaggtcaaggatatcgcaggtgatacattggcggat
ttacagacgcaagctgatgtggcagcgacaaaccaaggcacctatcgcggggttctgcgc
aatgatgaggcctatattgagcgacttgagggcgttgatggtgtgaaggcaccattcgcc
atcaaacgtaataaaaacgggtcgtttgcgaaggcagcggacgtcgttgatgaagccgat
ttggatattttgctggcctttaacgaagccaaaatccgccagattgcgagccaaattttg
gccggacaattcccactattgccattccgcgatggcccaaacaaaaccggaatgatgtat
acgccgtttaagccggttatgatgtttgatgccatgatgggaaatcagtatcgcaatatt
aaaaagttagatgcgaaggatgctttggcagcaatgcaatcagttattacaaacgaggag
gacgactag
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