Weissella cibaria: AO080_04040
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Entry
AO080_04040 CDS
T04106
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
wcb
Weissella cibaria
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wcb03016
]
AO080_04040
Enzymes [BR:
wcb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AO080_04040
Transfer RNA biogenesis [BR:
wcb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AO080_04040
Prokaryotic type
AO080_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALI32671
LinkDB
All DBs
Position
852719..853468
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AA seq
249 aa
AA seq
DB search
MPRYKATISYDGTEFYGWQVQPGKRTVQLEMEKVVNKMAKDPADHIRVQGSGRTDARVHA
QGQVVHFDLPFDIPNEAVRKGLSTMLPYDIGIKSVEKVDELFHAQFSAHNKTYRYRLSTT
EFIDPFKRNYTGHWHRRIDTSLMQQAIGDYVGEHDWLSFVASGFQQKTTVRTVYSAKMWE
KPEEDEIWFEFTGNGFLYNQIRIMVGVLLEIGNGSRPVDDIQRLFAVKDRQQARFTAPAQ
GLYLMSVDY
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctataaagcgacaatttcatacgatggcactgaattttacgggtggcaagtg
caacctgggaaacgaacagtgcaattagaaatggagaaggtcgtcaataagatggctaaa
gatccagcggaccacattcgggtgcaaggttcgggtcgaactgatgcgcgagtacacgcg
caagggcaggttgtccactttgacttaccgtttgatattccaaatgaagcggttcgaaaa
gggttatcaaccatgttgccttatgacattggcattaagtcagttgaaaaggttgatgag
ttgttccacgcacaatttagtgcacacaataagacgtatcgctatcggttgtcgacgaca
gagttcattgatccctttaaacgtaattatacggggcattggcatcgtcgcattgataca
tcattgatgcagcaagcgattggtgattatgtgggagaacacgattggttgagttttgtt
gcgtctggtttccagcaaaaaacaacggtgcgtacggtttattctgctaagatgtgggag
aaaccggaagaggatgaaatttggtttgaatttactgggaatggttttttgtataatcaa
attcgcatcatggtcggcgttttgctggaaattggtaatgggtcaaggccggttgatgat
attcagcgcttgtttgccgtaaaagatcgacagcaagcacgatttacagcgccagcacag
ggcctctatttaatgtcagttgactattaa
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