Weissella cibaria: AO080_05020
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Entry
AO080_05020 CDS
T04106
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
wcb
Weissella cibaria
Pathway
wcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AO080_05020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_05020
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AO080_05020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Rad17
AAA_29
nSTAND_NTPase5
ATPase_2
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALI32853
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Position
1089659..1092301
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AA seq
880 aa
AA seq
DB search
MAKPKETPMMKQYNEIKAQYPDAFLFYRLGDFYELFNDDAVLGSQLLELTLTQRNKNSAE
PIPMAGVPHHAAQNYIDILVDKGYKVAVVEQMENPAEAEGMVKREVVQLVTPGTRMRTSA
DAAKENNYLVSLSMTPAGGFGLAYTDLSTGEVKATTVTATGGVLNEISRLETKEIVTNAT
LPDDLMANLTSLGILVSHQDEEAANAETSYLTQQLTVPEQKEAADVLLAYLFATQKRSLD
HLQMASSYEIAQYLKLDRNSRANLELTVNLRTQQRSGTLLWLLDNTKTAMGGRALKQWLE
QPLLDRETIEQRYDKIGELLKDFFSRAALQETLKSVYDLERLAGRVAYGTANGRDLLQLR
NSLRQVPDIMVTLGDLDPAVFGDLLRRIDPVSDIEKLISTAIAEEPPISVTDGGVIRAGY
NTRLDDYRSVMKNGKQWLAELEAKERSETGISSLKIGFNKVFGYYIEVTKANIDKLDPDR
YTRKQTLVNAERFITPELKDREQMILEAETKSSDLEYQLFTEVREQIKNNITRIQKLAAT
LAELDVLQSLATVAEDYNFTRPELTDKQRLVIKDGRHPVVEKVLGHQSYVANDVFMDEDE
TIMLITGPNMSGKSTYMRQLALTVVMAQIGSYVPASEAELPIFDQIFTRIGAADDLISGN
STFMVEMSEANTAIQNATKRSLILFDELGRGTATYDGMALAQAIIEHVHNNTKAKTLFST
HYHELTALSDELPNLRNVHVGATEENGELVFSHKVLTGPADQSYGINVAKLAGLPDSLID
RAADILANLEAQDVSLEATAPTRPAKLAEPVATYQASVAEPEPEVVAAEPADTQLDLFAV
GPEIDPATQAVLDEIKATNIATMTPLDAMMKLNEWQKQMK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggctaagccgaaagaaacgccgatgatgaagcagtacaacgaaatcaaggcgcaatat
ccagatgcatttttgttttatcgtctgggagatttttatgaactgtttaatgacgatgcc
gttttgggctcacaattattagaattaacgttgacccaacggaataaaaattccgctgaa
ccgattccgatggctggcgtaccacatcacgccgcacagaattatatcgatattttggtc
gataagggatacaaagttgcggttgttgaacagatggaaaatccggctgaagcagaggga
atggttaagcgcgaggttgtccaactggtgacccctggtacccgaatgcgcacaagtgct
gatgcggcaaaagaaaataactatctagttagtctatcaatgacaccagcaggtgggttc
ggcttggcgtacactgatctatcaacgggtgaagttaaagcgaccacggtgactgcaact
gggggcgtacttaatgaaatcagtcgccttgaaacgaaggaaattgtcacaaacgcaacg
ttgccagatgatttgatggctaatttaaccagtttgggaattttggtgtcacatcaggat
gaagaagcggctaacgcggaaacatcatatttgacgcaacaactgacggtaccagaacaa
aaagaggccgctgatgtgttattggcctatctatttgcgacacaaaagcggtcacttgat
cacttgcaaatggcgtcatcatacgaaattgcccaatacttgaagttagatcgtaactca
cgcgctaatttggaattgacggttaatttacgcacccaacaacggtcaggtaccctctta
tggttactggacaatacgaaaaccgcaatgggtgggcgtgccttaaagcagtggttggaa
caaccattactggatcgggaaacgattgaacaacgctatgacaagatcggtgagttgctc
aaggatttcttctcgcgagcggcgttacaagaaacattgaagtcagtttatgatttggaa
cgtttggctggtcgagtggcatatggtacagcgaatgggcgtgacttattgcagttgcgc
aattctttgcgacaagtgccagacatcatggtgacactgggtgatttagatccggccgtc
tttggtgatttgttgcgtcgaattgaccctgtttcagacattgaaaagttaatttccacg
gccattgctgaagaaccaccaatttcggttaccgatggtggtgtgattcgggccggatat
aacacgcgcttggatgactaccgcagtgttatgaagaatggtaaacaatggttggccgaa
ttagaggcaaaggaacgtagtgaaaccggcattagctcattaaaaattggctttaataag
gtgtttggttactacattgaagtgactaaagcaaacatcgacaaactcgatccagaccgt
tatacacggaagcaaaccttggtcaacgcagaacgctttatcacgcccgaactaaaagat
cgcgaacaaatgattctggaagctgaaacgaagtcgagcgatttggagtatcagttattt
actgaagtccgtgagcaaattaaaaataatattacgcgtattcaaaagcttgctgccacg
ttggccgagttggatgtgctacaatcattggcaaccgtggcagaagactacaattttacg
cgacctgagttgacggataagcaacggttggtgattaaagacggtcgccacccggttgtt
gaaaaagtattgggccaccaatcgtatgtcgccaacgacgtctttatggatgaagatgag
accatcatgttgattacgggaccgaatatgtccggtaagtcaacctacatgcgtcaatta
gcgttgacggtggtgatggcacaaatcggttcgtacgtgccagctagcgaagctgaatta
cctatttttgatcaaatctttactcgcattggggcggcggacgacttgatttcaggtaat
tcaacgttcatggtggaaatgtctgaagcaaataccgccattcagaacgccacgaagcga
tcattgattttgtttgatgaacttggacgtggaacggcaacctatgatgggatggctttg
gcgcaagcgattattgaacacgtgcataataacacgaaggcgaaaacgttattctcaact
cactatcacgagttaacagcgttgtctgatgagttgcctaatttgcgaaatgttcacgtt
ggcgcgacggaagagaatggtgaactagtcttttcacacaaggtcttaacaggaccagca
gatcaaagttacgggattaacgtcgcgaaattggctggcttgccagatagtttgattgac
cgggcggctgatattttggccaacttggaggcgcaggatgtgtcattggaagcaacagca
ccaacacgacctgctaagttggctgaaccagttgctacctatcaagcgtcagtggctgag
ccagaacctgaggttgtggcggccgaaccagcggatacgcagttagacttgtttgcggtt
ggaccagaaattgatcccgccacgcaagctgttttggatgaaattaaagcaacaaatatt
gcaacaatgacgccattagatgccatgatgaagttaaatgagtggcaaaagcaaatgaag
taa
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