Weissella cibaria: AO080_07100
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Entry
AO080_07100 CDS
T04106
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
wcb
Weissella cibaria
Pathway
wcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AO080_07100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_07100
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AO080_07100
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Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DUF6364
AAA_22
MutS_III
Motif
Other DBs
NCBI-ProteinID:
ALI33226
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Position
1505439..1507817
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AA seq
792 aa
AA seq
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MNKKVLATLEYDAVKAQLRPYLSTAAGENELRNLLPTADANEMQAWLAETSDAAKVLRWQ
GGINIPKLADVKPHMQRLRIDAALSGTELAQVGRVLFTTGQMRMFFENLIEDRGEPLAAL
RPYYSRLVVMQDLTRRVNTAIDGDGRVTDEASPELHRVRQAITSTENAIRQKMQDYTRGK
SAQYLSDPIVTIRSDRYVIPVKAEYRSRFGGVVHDQSQTGQTLYIEPADVVDMNNRLREH
YIKERHEEERVLAELSDMLCPEAENIQKNAEVLGHLDFVNAKARYAAATKAQEPEYSPEN
HVRLLQARHPLLDPQKAVANDIIIGEDYKAIIVTGPNTGGKTITLKTLGLLQLMAQSGLF
IPTAEYSTVGLFKEVFADIGDEQSIEQSLSTFSSHMVNIVDILKQIDADSLVLFDELGAG
TDPQEGAALAMSILDAVGAKGSYTVATTHYPELKVYGYNRVDTINASMEFDVDTLRPTYK
FLLGIPGRSNALEISKRLGLDQSIIDAAASLTSEDSQELNDMIADLVERRNAVLAQQVQL
AQQVIENRQMKNDYEQKLEKMETEKARTLEEAKKEANHIVADSRKKADKIIADLRKMQLD
GVAVKENKLMDAKGALNAMRQEPSAENNRVLRKAKQAKSQDIAAGDTVLVREYGQQGTVK
RKLKDGKFEVQMGILKMVLAEDEIEKQAAAQTAKSEQKAAAKPRVSTNKAVNRANASATL
DLRGQRYEAAMGELDQFIDRALLNNLPSVEIIHGKGTGAIRQGVQEYLRSHRAVKDFSFT
GPDQGATYAELG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaagtcttggcaacccttgagtatgatgcggtaaaggcccagttgcggcca
tacctctcaacggctgccggtgaaaatgagttgcgcaacttgttgccaactgctgatgcc
aatgaaatgcaagcttggttggcggaaacgtctgacgcagctaaggtattgcgttggcaa
ggagggattaatattcccaagttggctgatgttaagccacacatgcaacgtttacggatc
gatgcagcgctgagcggcacagaattggcccaagttggtcgggtgctatttacaaccggt
caaatgcgtatgttctttgaaaacctaattgaagaccgcggtgagccattggctgcattg
cgaccatactactcacgtttggttgtgatgcaagatttgacgcgccgtgtgaacacggca
attgatggtgatggtcgtgtcactgacgaagcgtcacctgaactacaccgggttcgccaa
gctatcacttcgactgaaaatgcaatccgacagaagatgcaagattacactcgtggtaag
tcagcgcagtatctgtcagatccaattgtgacgattcgaagtgatcggtatgttattccg
gttaaggccgaataccgtagtcgttttggtggcgtcgtgcacgatcaatcacaaactggt
cagacattatatattgaaccagctgacgtggttgatatgaacaaccgtttgcgtgagcac
tatatcaaggagcgtcacgaagaagaacgtgttttggcagaattgtcagatatgttgtgt
ccggaagccgaaaacattcagaagaatgcagaagtgttaggccacttggattttgtgaac
gcgaaggcgcgttatgctgcagcaactaaggcccaggagccagagtacagtccagaaaat
cacgtgcgtttgctccaagcgcgtcacccattgttggacccacaaaaggcggttgccaac
gatattattatcggtgaagactacaaggcgattattgtcactggaccaaacaccggtggt
aagacgattaccttgaagacacttggtttgttacaattaatggcccaatcaggtttgttt
atcccaacggctgagtattcaacggtcggcttgtttaaggaagtctttgctgatattggt
gatgagcagtcaattgaacaatcattgtcaacgttctcatcacacatggtcaacattgtt
gatattttgaagcaaattgacgctgattctttggtgctatttgacgaattgggtgctgga
acagaccctcaagaaggggccgctttggcgatgtctattctggatgcagttggtgccaag
ggttcatacactgtggcaacgacgcactacccagagttgaaggtctacggttacaaccgt
gttgatacaatcaatgcatcgatggagtttgacgttgacactttgcgcccaacgtacaag
ttcttgcttggcattcccggccgttcaaacgcgttggaaatctcaaagcgcttgggcttg
gatcaatcaattattgatgcagcagcttcattgacgtcagaagattcgcaagagttgaat
gacatgattgctgatttggttgaacgtcgtaatgctgttttggcgcaacaagtacagttg
gcgcaacaagttatcgaaaatcgtcagatgaagaacgattacgagcaaaagcttgaaaag
atggaaactgagaaagcccgtacgctggaagaagccaagaaggaagctaatcacatcgtg
gcagattcacgtaagaaggcggataagattatcgccgatttgcgtaagatgcagttagat
ggggtggctgttaaggaaaacaagttgatggatgctaagggtgccttgaatgcgatgcgt
caagaaccatcagcggaaaacaaccgcgttttgcggaaggctaagcaagctaagagtcaa
gatattgccgctggcgacactgttctggttcgtgagtacggtcaacaaggtaccgttaag
cgtaagctaaaggatggcaagttcgaagtccaaatgggtattttgaagatggtgctggct
gaagatgaaatcgagaagcaagcagctgcacaaacggcgaagtcggagcaaaaggcagcc
gctaagccacgtgttagcacgaataaggcagttaaccgtgcaaacgcatcggcaacgctt
gatttgcgcggtcaacgttatgaggcggcgatgggtgagctggatcagttcatcgatcgt
gccttactgaataacttaccttccgttgaaattattcacggtaagggaacaggtgctatt
cgccaaggtgtgcaagaatacttgcgttcacaccgtgcggttaaggactttagctttaca
ggtccagaccagggcgcaacatacgccgaactaggttaa
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