Weissella cibaria: AO080_08080
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Entry
AO080_08080 CDS
T04106
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
wcb
Weissella cibaria
Pathway
wcb03030
DNA replication
wcb03410
Base excision repair
wcb03420
Nucleotide excision repair
wcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AO080_08080
03410 Base excision repair
AO080_08080
03420 Nucleotide excision repair
AO080_08080
03440 Homologous recombination
AO080_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcb03032
]
AO080_08080
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_08080
Enzymes [BR:
wcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AO080_08080
DNA replication proteins [BR:
wcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AO080_08080
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AO080_08080
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO080_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALI33395
LinkDB
All DBs
Position
1693395..1696109
Genome browser
AA seq
904 aa
AA seq
DB search
MAKPTLLLIDGNSLAFRAFFALINQVDRFVNHEGLHTNALVGFNNLLDGIVDPFKPDLAL
VAWDAGKTTFRKGKFDDYKGNRDKTPQELVEQFEPLRKMVELHGIKSYELPGYEADDIIG
TTARMGEVAGYAVTIVTGDRDMTQLVTDDVSVWVTKKGISEIDHYTPAMVAEVYDGLTPA
QIVEVKGLQGDTSDNYPGVAGIGPKTAIKLMKEYHTIPEMYERIDEMKASKQKEKLIAGK
EDALLSRDLATIRTNAPVDYDLSSLTYNGPDYEAIIPFYQHLDFKAQLVKLANQGHTIPA
PTGVQNGADGEPAHDMNNTPLEVRSLTATNLTHIEQLGDEISFYLELDDENYHTANPVGF
VIGNNEHGYFVSRDIELLVQGTPVNRILQDATVKKNVFNAKGTIVALRRLGLTLPNVAFD
LLLVAYLLDANDNNNDMGALAHENGYYAVRTDEEVYGKGAKFAIPEADEDLFEHLGRKAM
AIQYLKDPLMAKLAEHEQTQLYDDIELPLTYVLADMEATGITVDANTLLEMRSKLTERLA
ELEQTIYQQAGHEFNVQSPKQLGVVLFEEMGYTPIKKTKTGYSTSVEVLEQMGDVPLVAS
ILAYRQIAKIQSTYVEGLLRVIHGSDSKVHTRYLQTLTQTGRLSSVDPNLQNIPVRIEEG
RRIRKAFVPREKGWRILSADYSQIELRVLAHITGDKHLQEAFINGEDIHAATARRIFGIG
PDETVDGNIRRQAKAVNFGIVYGISDFGLAKNIGVSRKQAKQIIDTYFEQYPGVKTWSEE
IIAAAREQGYVETIAHRRRYLPDIKAKNFNLRSFAERTAMNSPIQGSAADIIKIAMINME
KALRDAGLQAKMLLQVHDELIFEAPESELPILHELVPRVMDSAMTLDVPLIVASHEGETW
YDAK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaacattacttttaattgatggtaactccctggcttttcgggcatttttt
gcactgatcaatcaggttgaccgctttgtaaatcacgaaggtcttcataccaatgccttg
gttggctttaataacctattagatgggattgtcgatccattcaagccagatttggcgcta
gttgcctgggacgctggcaaaacaactttccgcaagggtaagtttgatgattacaagggt
aatcgtgataagacaccgcaagaactagttgaacaatttgaaccgttacgtaaaatggtg
gaattacacgggattaagtcatacgagctacccggttacgaagctgatgacattattggg
acaacggctcggatgggtgaggtcgctggttatgcggtgaccattgtgacgggtgatcgt
gatatgacccagttggtgactgatgatgtctcagtttgggtaactaagaagggcatcagc
gaaattgatcattatacgcctgcaatggttgcggaagtctatgatggtctgacaccggcc
caaatcgtcgaagtgaaggggttgcagggtgacacgagtgataattatccaggtgttgct
ggtatcggtcctaaaacagcgatcaagctgatgaaggaatatcacaccattcctgaaatg
tatgaacgcatagacgaaatgaaagcctcgaagcagaaagaaaagttgattgccggcaag
gaggatgcgctcttgtcgcgtgatttggcaacgattcggacaaatgcaccggttgattat
gatttatctagtttgacgtacaacggtcctgattacgaggcgattattccgttctatcaa
cacctagattttaaggcccagctagtaaagttggctaatcaggggcataccattccagcg
ccaacgggtgtgcagaatggggcggatggtgaaccagcccatgatatgaacaatacgcca
ttagaagttcgctcattaacggccactaatctaacacatattgaacaacttggtgatgag
attagtttttatcttgagcttgacgatgaaaattatcatacggcaaacccggttggtttt
gtaatcggtaacaacgaacacggctattttgtgagtcgcgacattgagctactggtacaa
ggcacaccggttaaccgaattttacaagatgcaactgttaaaaagaacgtcttcaatgcg
aaggggacgattgttgcattacgtcgcttaggcctaacattgcctaacgtcgcatttgat
ttgttgttagtggcatacttgcttgacgcaaatgacaacaataatgatatgggggctttg
gcccatgaaaatggttactacgccgttcgtacggatgaagaagtttatggtaaaggcgct
aaattcgcgattcctgaggctgatgaggatcttttcgaacacttggggcgcaaagccatg
gccattcaatatttgaaggacccattgatggcgaaattggcagaacatgaacaaacgcag
ttgtatgatgacattgaattgccactaacgtatgtgctggccgatatggaagcgactggt
attacggttgatgcgaacacgttgcttgaaatgcgcagtaaattaacggagcggttagcg
gaactcgagcaaactatttaccaacaggccggccacgagtttaatgtgcagtcgccaaag
cagttaggtgtggtcttatttgaagaaatgggttacaccccaatcaagaagacgaagact
ggttattcaacaagcgtagaggttttggagcaaatgggcgatgtaccgctagttgcctca
attttggcttatcgtcaaattgcaaaaattcaatcgacttacgttgaggggctgctacgt
gtgattcatggttcggattctaaggtgcacacgcggtatctgcaaaccctaactcaaact
ggccggttgtcgtcagtcgatccaaatctgcaaaatattccggtacggattgaagaagga
cgtcggattcgtaaagcctttgtaccacgtgagaaggggtggcgaattctaagtgccgat
tattcacagattgagttgcgtgtcttggcacatattacaggcgataagcacttacaagaa
gcgtttatcaatggtgaggatattcacgctgcgacagcgcgtcgtattttcggtattggc
ccggatgagacggttgacggtaacatacgtcgtcaagccaaggcagttaactttggtatt
gtatatggtatttctgattttggcttagcaaaaaatattggtgtctcacgaaagcaagcc
aagcaaattatcgatacgtactttgagcaatatcctggggttaagacatggtctgaggaa
attatcgccgcggcacgcgagcaaggatatgttgaaacgattgcacatcgtcgtcgttac
ttgccagacattaaggcgaaaaatttcaatttacgtagttttgcggaacgcacagctatg
aattcacccattcaaggttcggctgctgatattattaaaatcgccatgattaacatggaa
aaagcgttgcgtgacgctggtttgcaagctaaaatgctcctgcaagtacacgacgaattg
atttttgaagcgcctgagtcagaattgccaattttgcatgagctggtgccacgcgtcatg
gattcagcaatgacattggatgtccctttgattgttgcatcgcatgaaggtgaaacttgg
tatgatgcaaagtaa
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