KEGG   Weissella cibaria: AO080_08195
Entry
AO080_08195       CDS       T04106                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
wcb  Weissella cibaria
Brite
KEGG Orthology (KO) [BR:wcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wcb03400]
    AO080_08195
Enzymes [BR:wcb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AO080_08195
DNA repair and recombination proteins [BR:wcb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AO080_08195
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII Helicase_C AAA_22 RNase_H_2 DEDDh_C Rv2179c-like DUF4461 DEAD_2
Other DBs
NCBI-ProteinID: ALI33414
LinkDB
Position
1717151..1719973
AA seq 940 aa
MLNRDIYAVVDLETTRTTSETGRIIQIAVAFVQNKKIINQFSTLVNPGEQIPRNITQLTG
ITQNMVKGAPFFEDVAMTLHAMLQGTIFVAHNVNFDLPFLNAEFERVGLTALKSTSLDTV
PLSQILWPTAPGYRLVDMTNYLSLEHNHPHQADSDALATGELLIAILKRAEGLPMITLQA
LADLPLVLPRDTKTVFEKALAKNQAEPQPLPSHLQVIDSLALRRFSEPAPLVTGKATSYP
AKKAAKEQLYGKTLAYREQQAKLMNAIYTHYTEAELSETPGETAFVAEAPTGMGKTLAYL
LPYAYLADEQRKQVVVAVPTITLQQQVTETINTTLKDILPFEVRGASLKGRTHYLNLQSF
KRALRVDEGSTSLQFIKAQILVWLTETLTGDFDELNLINPQVDFMAKLAQPANNPAGSPY
YGHEFSERQHVLAQNAQFLVVNHAYLAEYAAELGDSIDTPYLIIDEAQNLPNAVLEQSRH
QLPFQVWLTRVQNATNLVLRDNEPSIGIILNRLVGGQQLKSRFLQSLEALSSELPKLQVA
FYRRFLLNGHTPATEGHYEVELPISDLAQFWVDQTHRLQSMRQAVRDLADSLDYLLAQFS
NTKNAFSLSERQHLADFRRLLESIAKYEQRLTTFQQDLVDFPDASVFWLTENQNHDNSNL
KLSGGLLHTLDFFKDKVYPHFMPPTVIGATLFTSTKSGYLYDRLNIDRETVFARRYPEVF
DFAHQAELVMVENAPSPTDGGYVSYLAKQLVQLTTTVQENTLVLFNSLETIQQVYNHMQS
NQTWQQGNMTLLAQGMTGTRSKIMKRMANESHLVVLGANSFWEGIDLPGDQLRLVVIARL
PFDQPNTVLQRAEEAVLMAHGKQPFYQSTLPKAVLRLRQGVGRLIRKPDDFGAVVIYDPR
ILTKSYGKTLRNMMPDQMPQHVSQDRDVVPELKKFFDQHR
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgctaaatagagacatctatgcggttgtggacttagaaacaactcgtacaacgagcgaa
acgggccgtattattcagattgcggtcgcattcgtacaaaacaaaaaaatcattaatcaa
ttttcaacattggttaatccgggcgagcaaatcccccgcaatattacacaattgaccggt
atcacccagaacatggtaaaaggggcaccgttctttgaagacgtcgcaatgacacttcat
gcgatgctacaaggcacaatctttgtggcgcataatgttaattttgacctaccattttta
aatgcagaattcgaacgtgttgggttaaccgctcttaaaagcacgtccctcgatacagtg
ccacttagtcaaattctttggccaactgcaccaggttaccgcctagtcgacatgacaaat
tacttgtcactcgaacacaatcatccacaccaggctgatagtgatgcattagcaaccggt
gaattgttgattgccatcttaaaacgggcagaagggttaccaatgattacgcttcaggcg
ttagctgatttgccattggtcctaccacgcgacacgaaaaccgtatttgaaaaagcgtta
gcaaaaaatcaagcagagccacaaccattaccgagtcacttacaagtgattgatagtttg
gcgttacgtcgtttttcagaaccggcaccgttggttactggcaaggcgacaagctatcct
gctaaaaaggctgcgaaagagcaactttacggcaaaacgttggcgtaccgtgaacagcaa
gctaagttgatgaatgccatttacacgcattacaccgaggctgaactctcagaaacacca
ggggaaacagcctttgttgcggaagcgccgacggggatgggcaagacgttagcttattta
ctaccatacgcatacctagctgatgagcagcgcaagcaagtggtcgtcgccgttccaaca
attacgttgcaacagcaagtgaccgaaacaatcaatacaacattgaaggatattctgccg
tttgaagttcgtggcgccagcttgaagggacgcacacattatttgaacttgcagagtttc
aagcgcgcactccgcgttgatgaggggtcgacatccctccaatttattaaggcacaaatc
ttagtttggttaaccgaaacgttaactggtgattttgatgagctgaacttaattaacccg
caggtcgatttcatggcaaaattagcccagccggctaataatccagcaggatcaccttac
tacggtcacgagtttagtgaacgccaacacgtcttggcgcaaaacgcccaattcttggtc
gttaaccacgcctacttggcggaatatgccgctgaattgggtgacagtattgatacacca
tatttaattattgatgaagcgcaaaatttgccaaatgcagtcttagaacaaagtcgccat
caattaccatttcaggtttggttgacacgtgttcagaacgcgacaaatttggttttgcgc
gataacgaaccttcaattggcattattttgaatcggttagttggtgggcaacagctcaag
tcacgttttctgcaaagtcttgaagcattgtcttcagagttgcccaaattacaagtggca
ttctaccggcgcttcttgttaaacggacacacgccggcaacggaaggccattacgaggtt
gagttaccaatttctgatttagcgcaattttgggtcgaccaaacacatcgtttgcaaagt
atgcgacaggccgtacgtgatctagcagactccttggattatttgttagcccaatttagt
aacacgaagaatgccttctcactcagtgaacggcaacatctagctgatttccgccggtta
cttgaaagtattgcgaaatacgagcaacgactaaccactttccaacaggatttggttgat
tttccagatgcgagtgtgttctggctaaccgaaaatcaaaatcacgataacagtaattta
aagttgagcggtggtttgttacacacgcttgatttctttaaagacaaggtttatccgcat
ttcatgccaccaactgtgattggtgcaactttgtttacctcaacaaagtcggggtactta
tatgatcggttaaatatcgatcgtgagacggtttttgcccggcgttaccctgaagtcttc
gattttgcgcatcaagctgaattggtgatggttgaaaatgcgccatcgccaaccgatggt
ggctacgttagctacttagccaagcagttggttcagttaaccacgacggtgcaagaaaac
acgctggtattgtttaactcattagagacgattcaacaggtctataatcacatgcagtca
aatcaaacgtggcagcagggcaatatgaccttgttggcgcaggggatgacaggtacgcgt
agcaaaattatgaagcgcatggcgaatgagtcacatttggtcgtgcttggtgcgaatagt
ttctgggaaggcattgatttgccgggtgaccaattacgtttggtcgtgattgcccgctta
ccattcgatcagcctaataccgtcctccagcgtgctgaagaagccgttttgatggcgcat
ggtaaacaaccgttctaccagagtaccttacccaaagctgtcttacggcttcgtcaggga
gtagggcgtttaattcgcaagccggatgactttggtgcggttgttatctatgacccacgc
atcctaacaaagtcgtacgggaagaccctgcgaaatatgatgccagatcaaatgccacag
cacgtttcgcaagaccgagatgttgtccctgaattgaagaaattctttgaccaacaccgc
taa

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