Weissella cibaria: AO080_08245
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Entry
AO080_08245 CDS
T04106
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcb
Weissella cibaria
Pathway
wcb03420
Nucleotide excision repair
wcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO080_08245
03430 Mismatch repair
AO080_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_08245
Enzymes [BR:
wcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO080_08245
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO080_08245
MMR (mismatch excision repair)
Other MMR factors
AO080_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALI33422
LinkDB
All DBs
Position
1728500..1730791
Genome browser
AA seq
763 aa
AA seq
DB search
MSSLLDGMNDKQAEAVMTTEGPLLIMAGAGSGKTRVLTHRVAHLIKDLNVMPWRILAITF
TNKAAREMKERIGQLVDAEDADAVWVSTFHALAVRILRRDIDKLGYKKDFSIIDAGAQRT
LVKRILKDLNVDIEKYDPRSVIGAISNAKNAMEKPATYTEKANGPFEEIVAKAYTEYQHQ
LAIAQSVDFDDLIMLTIELLHQEPEVLEFYQEKFLYVHVDEYQDTNDAQYELVTLLSAKH
RNLAVVGDSDQSIYGWRGANMQIILNFNKDYKDAKTVMLEQNYRSTQTILDAANAVIEHN
NERIAKNLWTDNGMGDKITYYRGQSDKDEALYVIAQIRDGVQNQERNYRDFAVLYRTNAQ
SRGIEEALVKANMPYTMVGGSKFYERKEIRDVLAYLALVTNPADNESFLRVVNEPKRGIG
NTSIEKLRAFALQNDWPLLDAATNAVMIPGLTTRAANQLTQFAELISTLRQQTTFDLSIT
DLTRQILDRTGYEEQFKASPTPENQGRLENLAEFLSVTEEFDKKYEPTEESISKYVDFLG
ELALVSDLDSVDEDTDNQVTLMTLHAAKGLEFPVVFLVGMEENLFPLSRAAADDAQLEEE
RRLAYVGITRAKEKLFITNAYSRLLYGRTTSNIPSRFIDEISPELIMQPAGQQLSATANR
EGALPFARRTQQATATTFAGRQRQATQSGTPFRTTSTVTSATPGTGADKKAWTIGDAVSH
KKWGVGHVVKVSGTGEDQELDIAFPDQGIKRLLAAFAPIQKVK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagttcactacttgatggcatgaatgacaaacaggctgaggcggttatgacaacggaa
ggtccgttgcttatcatggccggcgccggttctggtaagacacgcgtgttgactcaccgc
gtcgcccacctgattaaagacttaaacgtgatgccttggcgtattttggccattacattt
acaaacaaagcggcccgcgaaatgaaagaacgtatcggtcaactggttgacgccgaagat
gcagatgcggtctgggtatcaactttccacgctttagctgtgcgaattttacgtcgtgat
atcgacaaactcggctataaaaaagatttttcaatcatcgatgctggtgcgcaacgaaca
cttgtaaagcgtatcctaaaagatttgaacgtggatatcgaaaagtatgatccccgttcg
gtgataggtgctatttctaacgcaaaaaacgccatggaaaagccggctacctatactgag
aaagctaacggtccgttcgaagaaattgtggcgaaagcttacactgaatatcagcaccaa
cttgcgattgcacaatctgtcgactttgatgatttgattatgttaacgattgaattgttg
catcaagagccggaagtgcttgaattctatcaagaaaaattcttatacgtgcacgtcgat
gagtatcaggacaccaacgacgcccaatatgaattagttacactattatcagcaaaacac
cgcaacctggctgttgtgggagactctgatcagtctatctatggttggcgtggggctaac
atgcaaatcatcttgaattttaataaagattacaaagatgctaagaccgttatgttggag
caaaactaccgttcaacgcaaaccattttggatgctgccaatgcggttatcgaacataat
aacgaacgcatcgctaagaatctgtggactgacaatggtatgggcgacaaaatcacttat
taccgtggacaatctgataaagatgaggcgttgtatgttatcgcccaaattcgtgacggt
gtacaaaatcaggaacggaattatcgcgactttgccgtgttatatcgtacgaatgcccag
tcacgtggtattgaagaagctttggtgaaggccaacatgccttatacgatggtgggtggt
tcaaagttctatgagcgtaaggaaatccgtgatgttcttgcctatttggctttagtgacc
aatccagctgataatgaaagctttttgcgcgtggttaatgagcccaaacgcggtattggt
aacacctcaatcgaaaagttacgggcctttgccttacagaatgattggccattattagat
gccgccacgaatgcggtgatgattccaggattaacaactcgtgccgctaatcaactgacg
caattcgctgaattaattagcacgctccgccagcagacaacattcgacctaagtattacg
gatttgacacgtcaaattttggatcgtacgggctatgaagaacaattcaaggcctcacca
acacccgaaaaccaaggtcgattggaaaacttggcagaattcctatcagtaactgaagaa
tttgataagaagtacgaaccaacggaagaaagcatctctaagtatgtggacttcttaggt
gaattggcccttgtgtctgaccttgatagcgtggatgaggacacagataaccaagtcact
ttgatgacgttacacgctgctaaaggattggaattccctgtggtcttcttggttgggatg
gaggaaaatcttttcccactatcccgcgcagctgctgacgatgcccaactagaggaagaa
cgtcgattggcatatgttggcattacgcgtgccaaagagaagctctttatcactaacgcg
tactctcgattgctgtatggtcggacgacaagtaacatcccatcacgattcatcgatgaa
attagccctgagctgattatgcagccagccggtcaacaattgtccgctactgcaaatcgt
gaaggtgcattaccatttgcacgccgaacgcaacaagcgacggcaaccacgtttgctggt
cgacaacgccaagctacgcaaagtggcacgccattccgaactacttcgacagtcacgtca
gcaacacctggcactggcgctgataaaaaggcctggacgattggtgatgcggttagtcat
aaaaagtggggtgtcggccatgttgttaaagtttcaggtactggtgaggatcaagaatta
gatattgctttccctgaccaagggattaaacgtttgctcgctgccttcgccccaattcaa
aaggtgaagtag
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