Weissella cibaria: AO080_08655
Help
Entry
AO080_08655 CDS
T04106
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
wcb
Weissella cibaria
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_08655
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AO080_08655
Archaeal homologous recombinant proteins
AO080_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
WSN
Motif
Other DBs
NCBI-ProteinID:
ALI33499
UniProt:
A0A0N9YRP0
LinkDB
All DBs
Position
complement(1816520..1819705)
Genome browser
AA seq
1061 aa
AA seq
DB search
MRPIKLALQYFGPYEQTTVDFERFTESKLFLITGDTGAGKTTMFDGMTYALFGEGTSERK
PEEMRSEFAPTTAETVVTFWFEHNGRYYRISRKPTQQLKKKRGAKSDDDTTERKAEVSLT
EVDETLQVPIAAMGEKIPVVRDAIQELLHLNADQFRKIILLPQNQFREFLAAQSDDKMTI
LRSLFGTEVFNQFTESLKEQQKDTLKQVTNLETQRDVALSQISWDDPAIADSAPTAVEKI
TALTAYIARLTDLVTARETEKATATTAVAQSQERVKAAEQLNRQFELLAENTAKQQLLDE
QADQINEQRQQATLLQWGNQQQSIVNDVTRYEEQLARVATELTQLATREAATTHSLSEAT
ATKAELLTQAADIKIAEARLRTITRTLLPNAQRLAMLIKQATQLAQQRQTRQTNEAQLKT
QLAELTAKEVELQTSLATVASVSSSREQLLVFATQADELQRIDERLQQTEKKVAQQAENL
MRVTRKLDTAKANLQDVIAMREAKATLRRELMIKQLHSELKIGEACMVCGQIYTGEGADP
HVGSTSYAEIKAAMAAVDEAETAEQQAIATEASLTTDATQTKQQYDTLAKQLTSERDGFA
SEYNQFFTAWATVFPNNLMPDTYDTSTVQTVIAQVRQHLSDQVTKQEQLTATLATVTEEI
ASVKTNLARTQTQLAGITTQLAENDSEQHELNSDGPLSTVSDYEVEQQALTEKIATYQQV
VQSADEKIRSAEQTQQELSQRRLVLNQEQNTYQTALDEAKGRLGIAITDGPVADEQVLQA
LLDRIQNQPDELIQLERQLAAYDTQRQTVATAIAQSRALTAGQERPDLSQLQAELTQKQT
ALDEATERLNKAEWLLESLQQQQTTILKLQTDIDAITSKSADLIKLTQAVDGNNLLHLRL
EPYVLRSFLYEVLTYANEHYIGTLSGGRYQFVLSSRQAGRANQNGLDIDIYDQDGGKVRS
TSTLSGGESFIAALSIALSMAEIVQRRAGGAKIDALFIDEGFGSLDSNTLNQALEALSMV
EQSGRLIGVISHVESMKRQIQQQMVVTKLGDGRSRLTYRMV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaattaaattagcgttacaatattttgggccctacgaacaaacgacggttgat
tttgagcgatttacagaatcgaaattgtttttgatcactggcgataccggtgccggtaaa
acaacaatgtttgatggcatgacctacgccttgtttggtgaaggaaccagtgaacgtaag
ccagaggaaatgcgcagtgaatttgcgcccacaacagcggagacggttgtgactttttgg
tttgagcataacggacgatactatcgaattagtcgcaaaccgacgcaacaattaaagaaa
aagcgtggtgcgaaatccgacgatgataccactgaacgtaaagccgaagtgtcattgact
gaggttgacgaaactttacaagtgcctatcgcggcgatgggcgagaaaattccggttgtg
cgggatgcgattcaagaattattgcatctaaatgcagaccaattccgcaaaatcattttg
ttaccacagaatcagttccgtgaatttttggccgctcagagcgatgataagatgaccatt
ttgcggagtctatttgggacggaagtttttaatcagttcacggagtcgttgaaggaacaa
caaaaagacacgttaaaacaagtcacgaatcttgagacccagcgagatgtggcgttgtca
caaatttcgtgggatgatccagcaattgcagatagcgcaccgacggccgttgagaaaatc
acggctttaactgcttatattgcgcgtttaacagacctggtgacggcgcgtgaaactgaa
aaggcgacggcaacaacggccgtggcgcaatcgcaggaacgggtgaaagcggccgaacaa
ttaaatcgtcaatttgagttgttggctgaaaatacggcaaagcaacaactacttgatgaa
caagccgatcaaattaatgagcaacggcagcaagcgacgctattgcagtggggaaaccaa
cagcaaagtatcgtgaatgatgtgacgcgatatgaagaacaactagcgcgggtggcaact
gaattaacacagctggcgacacgcgaagcggccacaacccatagcctgtcagaggcgacg
gctacgaaagcggaacttttaacacaagcagctgatattaagattgctgaagcacggttg
aggacaattacacggactttgttgcctaatgcgcaacgtctggcaatgctgattaagcaa
gcgactcagttggcccagcaacggcaaacacgacaaactaacgaagcccagttaaagacg
caattggctgaattaactgccaaagaagttgagctacaaacgtctttggcgacagtagcg
tctgtttcatcatcgcgtgagcaattgttggtttttgctacccaagctgatgagctacaa
cggattgatgaacgtctgcaacaaactgaaaaaaaggtcgcgcaacaggctgagaatttg
atgcgggtgacacgtaagctagatacggctaaagctaatctgcaggatgtcatcgcgatg
cgtgaagcgaaggcgacattgcgccgggaactcatgattaaacaacttcatagtgagctg
aaaattggtgaggcttgcatggtttgtggccagatttatacgggcgagggagctgacccg
cacgttggtagcacctcgtatgctgaaattaaggcggctatggcggctgttgatgaggct
gagactgcagagcaacaggcaatcgcgactgaagcaagtttgacgacggacgctacacaa
accaaacaacagtatgatacattggcaaagcaacttacgtcagaacgagacggatttgcg
agtgagtataatcagtttttcacagcatgggcaactgtgttcccaaacaacttgatgcca
gacacgtatgatacgtcaaccgtacagactgtcatcgcacaagttcgccagcatctatca
gatcaggttactaaacaagaacaactgacagcgacgttagcgactgtgacggaggagatt
gcatctgttaaaacgaatctagcacggacacaaacacaattagcgggcattacgacgcag
ctggctgaaaatgacagtgaacaacacgaattgaattcggacggaccgctttcaacagtc
agtgattatgaggttgaacaacaggcattgactgaaaaaattgcgacctatcaacaagtt
gttcagagcgctgatgagaaaattcgttccgccgaacaaacgcagcaagagctttcgcaa
cgacgtttggtattaaatcaagaacaaaatacgtaccagacggcattagatgaagcgaag
ggccgcctgggaattgcgattactgatggccccgttgcggatgaacaggtgctacaggcg
ttattagatcgcattcagaatcaaccggatgaattaattcaattagaacggcaattggct
gcttatgacacacaacgtcagacggtcgcgacagccattgcgcagagccgagcgttgact
gctggtcaagaacggccagatttgtcacagttacaagctgaattgacacaaaaacaaacg
gctttagatgaagcaactgaacgtttaaacaaagcggaatggctcttagagtctttgcaa
cagcaacagactacaattttgaaattgcaaacagacattgatgccatcacgtcaaagtca
gctgatttgattaaattgactcaggcggtcgacggtaacaatttgttacacttacgcctg
gagccatatgtcttgcgcagtttcctgtatgaggtcctaacctatgcgaatgaacactat
attggtaccttatcaggtggtcggtaccaatttgtgctctcaagtcggcaggcaggacgg
gcgaaccagaatggactagatattgatatttatgatcaagatggtggcaaagtccggtcg
acaagcacgttgtcaggtggggaatcatttattgcggcgctgtcgattgcgttgtcgatg
gcagagattgtgcaacgtcgagctggtggtgccaaaattgatgcgctgtttatcgatgaa
ggatttggttcactcgacagtaacacattgaatcaggccttggaagcgctctcgatggtc
gagcaaagtggtcgcttgattggtgtgatttcgcacgtagaatcaatgaaacgccaaatt
cagcaacagatggtggttacgaaactcggggatggacgtagtcgtctgacatatagaatg
gtctaa
DBGET
integrated database retrieval system
