Weissella cibaria: AO080_08790
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Entry
AO080_08790 CDS
T04106
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wcb
Weissella cibaria
Pathway
wcb03030
DNA replication
wcb03430
Mismatch repair
wcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AO080_08790
03430 Mismatch repair
AO080_08790
03440 Homologous recombination
AO080_08790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcb03032
]
AO080_08790
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_08790
Enzymes [BR:
wcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AO080_08790
DNA replication proteins [BR:
wcb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AO080_08790
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AO080_08790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALI33526
LinkDB
All DBs
Position
complement(1843743..1847126)
Genome browser
AA seq
1127 aa
AA seq
DB search
MVPLQTKTAFSLLQSPMMPAQLVKSAKAKGYTAVAITDNNVLYGMDNFYRAAKAADIKPI
LGLTATLHGLVTSQPYPIVFLVENQTGYHHLLAISSYIQTHDTTSFADIAQFLSGLYVIL
PAVGELSVVLGAEPERALTMIQTLITASTADHVFLGVTPTMRPELLTAMKQLADTTGARL
LAMAEVTYADASDQFAAQVIQKLGQGEVITNVGQAQREPATAYLPTVSEWQASFETAGLA
EAVANTDWIAEHSDFELVKSAVTLPAFTTPNGETSADYLRTLAQTGLKNRLHGLDVDASV
YRQRLDEELAVIIDLGFADYFLIVWDVINFAHKQAIRTGPGRGSAAGSLVAYTLWITDVD
PIAYDLLFERFLNPERAQMPDIDIDIPDNRREEVLAYLHEKYGHERVAQIITFSTMAQRA
VIRDVARVFGLNPSQIDTLSKAMPRDAADLTAAYEQSQPFRNALIDVPVDGELLYETARK
LEGLPRNSSLHAAGVVLSADPLVDTMPVQLGEDGRLMTQLPKGPVEALGLLKMDFLALSN
LNILDIALREIQKQEDSANFNIATIDLNDDTTLRLFRHGMTNGVFQFESAGMKNILRQLQ
PDRFEDIVAANALFRPGPMQNIPHFVARKHGQEAQDVPDQSMADILAPTYGIIVYQEQVM
RVAEQFAGFSLGGADLLRRAMSKKDGAKIAAMKTDFVNGAVAKGHDSQVAEQVFGYIETF
AQYGFNRSHAVAYSKLAFQLAYIKAHYPAAFYKAVLNDAIADKKKVSTYIAEAKASGVTL
LGPSINHSWQGYSMNKAGALQMGLASISGMRRDFRESILRERQENGAFKDLGNLIGRLES
KYRKAEQLEPLVYAGALDEFGYNRASILASLRGFVDAVGLAGESMSLFASLTPKVREVDE
LPSAEKLGYEREYLGVYLSGHPIEPYLNAIPENKRLDIASLAVGMNQATIIVYVENVKKI
RTKKGDQMAFVDGMDLTGSISITLFPQLFMRSAALLEPEKVLVVTGKVEQQRGRDDIQIV
ANTVMDAGEAIKRFSGANSQGQPETLTSRATGRWYLKITAAAEAAGALDALNVVIQSHHG
KNPVLAVYEATGKKLALGQQNWLTDGDDTLNALQQILGANNVVFQLD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgttacagacaaagacagcctttagtttgttgcaaagtccaatgatgccggcc
caattagttaaatctgccaaggcaaagggctacaccgctgtggcaattacggataacaat
gtcttgtatggcatggataatttttatcgcgcagcgaaggcagccgatattaagccgatt
ttgggcttaacagccacgttacacggccttgtaacatcacaaccttatccgattgtcttt
ttagttgaaaaccaaacggggtatcaccaccttttggcgattagcagctatatacaaacc
catgacaccacctcgtttgcggatattgcgcaatttttatcaggcttatatgtgattttg
cctgccgttggtgaattgtcggttgtactaggggcagaaccggaacgggcattgacaatg
attcaaacgttgattaccgcttcaacagctgaccatgtatttctgggcgtaacaccaaca
atgcgcccagaattgttaactgctatgaaacaattggctgacaccacgggagcccgttta
ttagcgatggcggaagtaacttatgctgacgcaagtgatcaatttgctgcgcaggtgatt
caaaaattggggcaaggtgaggtcattacgaatgttggccaggcacagagagaaccggcc
acagcgtatttgccgactgtcagtgaatggcaagcatcgtttgaaacggctggtctagcc
gaagcagttgcgaataccgattggattgccgaacactctgattttgagttggtgaagtcg
gctgtgacgttgcctgcttttacgacaccgaatggtgagacgtccgctgattatttacga
actttagcccaaacgggattgaaaaatcgattgcatgggcttgatgttgatgcgtctgtt
tatcggcaacggttggatgaagagttagcggttattattgacttagggtttgcggattat
ttcttaatcgtttgggacgtgattaattttgcgcataagcaagcgattcgaacgggacct
ggtcgtggatcggccgcgggttcattggttgcttatacgctatggattacggatgttgat
ccaattgcgtatgatttattgtttgagcgatttttaaatcctgaacgtgcacaaatgccg
gatatcgatattgatattccagataaccgccgtgaagaggtgcttgcctatctgcatgaa
aagtatggacatgagcgggtagcgcaaattattacgttctcgactatggcccagcgtgca
gttattcgtgacgtcgcccgggtgtttggactaaatcctagtcaaattgacacactatca
aaggcgatgccacgggatgctgctgatttaacggcagcctatgaacaatcacagccgttc
cgcaatgccctcattgatgtgccagtggacggtgagttactttacgagacagcccgtaag
ctagaagggctgccacgtaattcatctttgcacgcagcaggtgttgtgctgtcagccgat
ccattggttgatacaatgccagtgcaactgggtgaagatggtcggttgatgacccaattg
ccaaagggaccggtagaagcgcttggtcttttgaaaatggatttcttggcattgtcgaat
ttaaatattttggacattgcgctacgtgaaatccagaaacaagaagacagtgctaatttc
aatattgcgacgattgatttaaatgacgacacgacgttaagattattccggcacggaatg
acaaatggggtcttccaatttgaatcggccgggatgaagaatattttgcggcaactacag
cccgatcgctttgaggacattgtcgccgcgaatgcgcttttcagacctggaccaatgcag
aatattccgcatttcgtggctcgtaaacatggtcaagaagctcaagacgtgcctgaccaa
agcatggctgatattttagcgccaacctatggcatcattgtgtaccaagagcaggttatg
cgtgttgccgaacaatttgcgggcttctcactaggtggtgccgatttgttgcgtcgtgcg
atgtctaagaaggatggtgcaaaaattgcggccatgaagacagatttcgttaatggggct
gttgcaaaaggacatgatagtcaggtcgctgagcaggtattcggttatatcgagacgttt
gcacagtacgggtttaatcgctcccacgcggttgcttattcgaagttagcctttcaactt
gcttatattaaggcgcattatccagcagctttctataaagcggttttgaatgatgccatt
gcggataagaaaaaggtcagtacatacattgcagaggcaaaagcttcgggagtgacttta
ctaggcccaagtattaatcactcttggcaaggctactcgatgaataaagcgggtgcctta
caaatgggtttggcttcgattagtggtatgcgccgagattttcgtgaatcaattctgcgt
gagcgtcaggaaaatggggcgtttaaagatttgggtaacttaattggtcgtttagagagc
aaatatcgaaaagctgaacaattggaaccgttagtgtatgcgggtgccttggatgagttt
ggttacaaccgtgcctcaattctggcatcattgcgcgggttcgtcgacgcggttggttta
gccggtgaatcgatgtcgctctttgcgtcgctgacgccgaaagtacgggaagttgatgaa
ttgccatcggcagaaaaattgggttatgaacgtgagtatttgggcgtttatcttagtgga
cacccaatcgaaccgtacttaaacgcgatacctgagaataagcgtttggatattgcctcg
ctggcagtaggaatgaaccaggcaacgattattgtgtatgttgaaaatgtcaaaaagatt
cgcactaaaaaaggggatcaaatggcatttgttgatgggatggacctaacaggttcgatt
tctatcacgttattcccacaattgtttatgcgatcagcagcattattggaaccagaaaaa
gtactcgttgtgacgggtaaagtcgaacagcaacgcgggcgtgacgacatccaaatcgtg
gcaaatacggtgatggatgcgggagaagccattaaacgctttagtggtgccaatagtcaa
ggtcaaccggaaacgctaactagtcgggcaaccgggcggtggtatttgaaaataacagca
gccgctgaggcagcaggcgcgcttgacgcgttaaatgttgtgattcagtcacatcatggc
aagaatccagttttggcggtctatgaggcgacgggtaaaaagttagcacttggccaacaa
aattggttaaccgatggggatgacaccttaaatgccttacaacagattttaggggctaat
aatgttgtgtttcagttagactaa
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