Weissella cibaria: AO080_09490
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Entry
AO080_09490 CDS
T04106
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcb
Weissella cibaria
Pathway
wcb03420
Nucleotide excision repair
wcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO080_09490
03430 Mismatch repair
AO080_09490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcb03400
]
AO080_09490
Enzymes [BR:
wcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO080_09490
DNA repair and recombination proteins [BR:
wcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO080_09490
MMR (mismatch excision repair)
Other MMR factors
AO080_09490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
SLFN-g3_helicase
AAA_16
DEAD
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
ALI33662
UniProt:
A0A0N9YST4
LinkDB
All DBs
Position
complement(1995191..1997473)
Genome browser
AA seq
760 aa
AA seq
DB search
MEPYEAEQQRLDTVLEKIQDARVQNDLDRKNAEQKQADVENGWNDVRFKSSTYGSLFETA
MSVRQQQQMLQERELAMNSVEHQAVVLDRLQARPYFARIDVQEAGSETVEPIYIGLASFS
DSPDNFLVYDWRAPISSIYYDAGLGNVTYETPDGKQEANVHLKRQFQIEDGTIVTIFDTD
EAVGDQMLLNALSGESTTKMKSIVTTIQKEQNKIIRNTAAELLFVQGAAGSGKTSAVLQR
VAYLLYRYRGHLASGQVVMFSPNQLFNDYIDQVLPELGEQNMVQMTYYQYASRRLPKLQL
ETLQERFEAQPAGAQKRIIDLKGTSVYFDAMQRYADGLNKADIKVRPIKFRGQEIISKEK
IVDIYYSFNENYKLGNRLQGTKERLMKMLQGRIGNEMQADWVEAEIQNLTKEQYDTMLGD
NPREFKSDEEETKYLAKIIVTNALAPIAKGVNRNRFININNQFIHFLRSVPKLVNLAAYD
ITEVDWTKSVEYTVNKMKNGELPMADMTPFMLLFDLIKGSRGERDIRFVFIDEIQDYTPF
QLAFLKFSFPRARFTMLGDLNQAIFTKENAVSLQDELSRLFDPEKSEYVQLTQTYRSTQQ
ITDYSKAILINGAQIDAFEREGDKPVVKILPSQDKMAEATLMQLVANDEADETTAIITKT
LADAEVAYEALRERADVTIIRTENQRLVPGTIIVPAYLAKGLEFDAVIMWDASEGVYHGD
DERQLVYTIASRAMHQLTVLAVTSLTPLLAEVDERLYEKG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatatgaagccgagcagcaacgcttggataccgtcttggagaagattcaagac
gcaagggtacaaaatgatttagatcgaaaaaatgctgaacaaaaacaggctgacgttgag
aatgggtggaacgatgtccgcttcaagtcatcaacatacggcagcttgttcgaaactgcg
atgtctgtacgtcaacagcaacagatgttacaagaacgtgaattggcgatgaattcagtt
gagcaccaagcggttgtcttggatcgtttacaagcgcgaccatactttgctcgtattgat
gtgcaagaagctggttcagagacggttgaaccaatttatatcggcttggcatcgttctct
gattcaccagataatttcttggtttacgactggcgcgcaccaatttcttctatttattat
gatgcgggtttgggcaatgtgacctacgaaacaccggatggcaagcaggaagcaaatgtt
cacctgaagcgtcaattccaaattgaagatggcacgattgtgacgatttttgacaccgac
gaagctgtgggtgatcaaatgttgttgaatgctttgtctggtgaatcaaccactaagatg
aagtcaatcgtgacgacgattcaaaaggagcaaaataagattatccgaaacacggcagct
gaattgctgttcgtacaaggagcggccggttctggtaagacttcagctgttttgcaacgt
gtggcatacctactttaccgttatcgtggtcatttggcgtctggtcaagtggtcatgttc
tcaccaaaccaactatttaacgattatattgaccaagttttgcctgaattgggtgagcaa
aacatggttcaaatgacgtattaccaatacgcatcacgccgtttgcccaagttgcaactt
gaaacgttacaagaacgttttgaggcccaaccagctggcgctcaaaagcgtatcattgac
ttgaagggtacaagtgtctacttcgatgccatgcaacgctatgctgatggcttgaacaag
gctgatattaaggttcgtccaattaagttccgtggtcaagaaatcatttctaaggaaaag
attgtcgacatttattattcattcaatgagaactataagttgggtaaccgtcttcaaggt
acgaaagaacgcctaatgaagatgttacaaggtcgaattggtaatgagatgcaagctgat
tgggtcgaagccgaaattcaaaacttgacgaaagaacagtacgacaccatgttgggtgat
aacccgcgtgagtttaagtctgatgaagaagaaaccaagtatttggctaaaatcattgtg
acgaatgccctggcgccaatcgccaagggtgtcaaccgaaatcgttttatcaatattaat
aatcaatttattcatttcttgcgttctgtgccaaagttggttaacttggcggcctacgat
attacggaagtggattggaccaagtcggttgaatacacagtgaataagatgaagaacggt
gaattaccaatggccgatatgacaccatttatgctgttgttcgacttgattaagggtagt
cgtggtgaacgcgacattcgctttgtctttattgatgaaatccaagactacacaccattc
caattggcctttttgaagtttagtttcccacgtgctcgctttacgatgctgggtgatttg
aaccaagccattttcacgaaggaaaacgccgtcagcttgcaggatgagttgtcacgtttg
tttgatccagaaaagtcagaatacgtgcaattaacgcaaacgtatcgttcaacgcaacaa
attaccgattattcaaaggccattttgattaacggtgcgcaaattgatgcctttgaacgt
gagggtgacaagccagttgttaagattttgccatcacaagataagatggctgaagcaacc
ttgatgcaattggtcgctaatgatgaagctgacgaaacgacggcaatcattaccaagacg
ctggcagatgcggaagttgcgtacgaggcactccgtgaacgcgctgacgtgaccattatt
cggaccgagaatcaacgtctggtacctggcacaattatcgtgccagcctacttggcaaag
ggacttgaatttgacgcggtcattatgtgggatgcttcagaaggcgtttaccacggcgat
gatgaacgtcagttggtctacacaattgcatcacgtgctatgcaccagttgacggtctta
gctgtaacatcattgacgccattgctggccgaagttgacgagcgtttgtacgaaaagggg
taa
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