Weissella cibaria: AO080_09555
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Entry
AO080_09555 CDS
T04106
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
wcb
Weissella cibaria
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wcb03019
]
AO080_09555
Messenger RNA biogenesis [BR:
wcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AO080_09555
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Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
TraI_2
tRNA_anti-codon
PP-binding
HEPN_SAV_6107
Motif
Other DBs
NCBI-ProteinID:
ALI33674
LinkDB
All DBs
Position
complement(2011919..2012872)
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AA seq
317 aa
AA seq
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MAEVKQLRDYQVDERMDIFVLLKEVDPRVTQQGKRYLAVSVADRSMEIRGMKWDATQEEA
DTLQAGMVIFMTAVRQVYQDKPQLKILSMRPTRVGEPQDPSDFMNAAPMKASEMEEEVSA
LIFQITNATWQRIVRHLLSKYHDEFYKYPAAKINHHAFAGGLGFHSLSIARLAQAIVKQY
PGVNASLLYAGALLHDLGKVIELTGPIATQYTTAGNLIGHIVLIDEQIVLAANELHLDLY
SEDMLVLRHTVLAHHGLMEYGSPVRPLIKEANILHQLDELDANMQSFDNALAETEPGEFS
QRQWALDNRNVYKPDLK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtgaaacaactgcgcgattatcaagttgatgagcgcatggacatctttgtc
ctattaaaggaagttgatccacgggttacacaacaaggcaaacggtatctggctgtctct
gttgcggatcggtcgatggaaatacgcggcatgaagtgggatgcaacacaggaagaggcg
gatacattgcaagccggcatggttatttttatgacagctgttcggcaagtatatcaggat
aagccacaactcaaaattctatcaatgcgcccaacccgagtgggcgaaccgcaagatcca
agtgatttcatgaatgcggcaccaatgaaggcgagcgagatggaagaagaagtctcggcg
ttgattttccaaattactaacgcgacatggcaacggattgtgcgccacttgttatcgaag
tatcatgatgagttttataagtacccagcagctaagatcaatcaccacgcctttgctggt
ggacttggcttccactcattgtcgattgctcgtttggcccaagcgattgtgaagcagtat
ccaggggtcaatgctagcttgttatatgccggtgctttgttgcacgatttgggtaaagtg
attgaactaaccggcccaattgcaacacagtatacgacggcaggtaacttaattggccac
attgtcctaatcgatgaacagattgttttggcagcaaatgaactccatttggatttgtat
agcgaagacatgttggtgctacgccatactgtgttagctcaccatgggttgatggagtat
ggatcacctgtccgtccgttgattaaggaagcgaatattttgcaccagttggatgaacta
gatgccaatatgcaaagttttgataacgcgttagccgaaacagaaccgggtgagttttca
caacgccagtgggcattagataatcgaaatgtatacaaacctgatctaaaataa
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