Weissella cibaria: AO080_11325
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Entry
AO080_11325 CDS
T04106
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
wcb
Weissella cibaria
Pathway
wcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO080_11325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wcb03019
]
AO080_11325
Messenger RNA biogenesis [BR:
wcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AO080_11325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ALI33997
UniProt:
A0A0D1K202
LinkDB
All DBs
Position
complement(2369734..2371296)
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AA seq
520 aa
AA seq
DB search
MNIAMIILLSLVAIVIGVVIGYMVAKTRINHTLTIAHQTASDITSQAATDAEQMKKSALV
EARDESQRYQDRIERELQERRSEVKSQEDRLVSRESVLDRKDASLQKREEVISEKETKLD
QQRQSVNDKQKRAESLIDEREAKLVEIANLSREDAREQILSETKEALVSERAVMIKESEE
QAAAEAEKRAKNLVVSAIQRSAADMVAETTVSVVTLPNDDMKGRIIGREGRNIRAIETVT
GIDLIIDDTPEAVVLSGFDPVRREIAKNALEKLIADGRIHPARIEEMVEKARKEMDEHIR
EVGEQTIFDLGIHSMHPDLIKTIGRMNYRTSYGQNVLVHSIEVAKLTGMLAAELGEDVTL
AKRAGLLHDIGKAIDHEVDGSHVELGVEIAKKYKERPVVVNAIASHHGDVEPDSVIAVLV
AAADSISAARPGARSESLENYVQRLQQLEAIANDFNGVEKSFAIQAGREVRVIVEPAAVT
DLEATVLARDIKNQIEHDLDYPGHIKVTVIRESRSVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgcaatgatcatcctgctgtcgcttgtcgcaatcgtaatcggtgttgtaatt
ggatatatggtggctaagacacgaattaaccacacattgacgattgcgcaccaaaccgca
tcagatattacgagtcaagctgccactgatgccgagcagatgaagaagtctgctttggtt
gaggcacgagatgaaagccaacgttaccaagatcgtattgaacgtgagcttcaagaacgt
cgttcagaagtgaagtcacaagaagatcgcttggtaagtcgtgagtctgtattggatcga
aaggacgcctcattgcaaaagcgtgaggaagttatttcggaaaaagaaacgaaacttgat
caacaacgacaaagtgtcaacgacaagcagaagcgtgctgaatcattgattgatgaacgc
gaagcgaagttggtggagattgcaaacttgagtcgcgaagacgctcgtgagcaaatcttg
tcagaaaccaaggaagctttggtttctgaacgcgctgtcatgattaaggaaagcgaagag
caagctgcggccgaagctgaaaagcgggctaagaacttggtagttagtgctatccaacgt
tctgctgcagatatggttgctgaaacaacggtatctgttgtgacgttacctaacgatgac
atgaagggacgaattatcggtcgtgaaggccgaaacattcgggccatcgaaacggttact
ggtattgatttgattatcgatgatacaccagaagctgtggtattgagtggctttgatcca
gtccgtcgtgaaattgcgaagaatgctttggagaagttgattgctgatggtcgtattcac
ccagctcgcattgaagagatggtggagaaggcccgcaaggaaatggacgagcacatccgc
gaagtcggtgagcaaactattttcgatctcggcattcatagcatgcacccagacttgatt
aaaacaatcggtcgcatgaactatcgtacaagttacggtcaaaacgtactggtacactca
attgaagtcgctaaactaactggcatgttggctgctgagttaggtgaagacgttacgctt
gccaagcgcgcaggattattacacgatattggtaaggcgattgatcatgaagtggatggt
tcccacgtagaacttggtgttgaaattgccaagaagtacaaggaacgtccagttgtggtt
aacgctattgcctcacaccacggtgacgtagaacctgattctgtcattgctgtcttggtt
gcagctgctgattcaatttcagctgctcgaccaggtgcacgttcagagtcacttgaaaac
tacgtgcaacgtttgcaacaacttgaagccatcgcaaatgacttcaacggggttgaaaag
tcatttgcgatccaagcgggtcgtgaagttcgcgttattgttgagccagcagctgttacc
gatttggaagcaactgttttggcccgcgatatcaaaaatcaaattgagcatgatttggat
tacccaggccacattaaggttacggttattcgcgaatcacgttcagttgaatacgcaaag
taa
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