Weissella tructae WS08: WS08_0060
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Entry
WS08_0060 CDS
T03228
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
wce
Weissella tructae WS08
Pathway
wce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WS08_0060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wce03021
]
WS08_0060
03400 DNA repair and recombination proteins [BR:
wce03400
]
WS08_0060
Transcription machinery [BR:
wce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WS08_0060
DNA repair and recombination proteins [BR:
wce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WS08_0060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
AIG64999
UniProt:
A0ABN4DF10
LinkDB
All DBs
Position
78653..79234
Genome browser
AA seq
193 aa
AA seq
DB search
MAITQFEGQNKSELSMIEVARAILSDRHETMAFSDLLNEVQSFTGKTDDEIRARLAQFYT
DLNIDGSFISLGDNVWGLRSWYPIDSIDEAVHLDLEEEEATAKPKKKRKKINAFLADVAD
DDDVIDYNDDDPEDDDFGAVETSKNEDEDAEAADDDSDDDSDDDFDEVAGGIGEEIGGIA
PVDDDYGSGDIEK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttggcgattacacaatttgaaggtcaaaataagtcagaattatcaatgattgaagtggcg
cgggcaattttgtctgaccgtcacgaaacaatggcgttttctgatttgttaaatgaagtt
caatcatttacgggaaagacggatgatgaaatccgcgcccgtttggcacaattctatact
gatttaaatattgacgggtcatttatctcattgggagataatgtttgggggctacgttca
tggtatcctatcgattctattgacgaagctgtccacttggaccttgaagaagaagaagca
acagcaaagcctaagaagaagcgtaagaagattaacgccttcttggccgacgttgcggat
gatgacgatgtgatcgactacaatgatgacgatcctgaagatgatgactttggtgcggtt
gaaacgtcaaagaatgaagatgaagacgctgaagcagcggatgatgattcagatgacgat
tcagacgacgactttgatgaagttgcgggtggtatcggtgaagaaattggtggaattgca
ccagttgatgacgattacggctcaggtgacatcgaaaagtaa
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