Weissella tructae WS08: WS08_0374
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Entry
WS08_0374 CDS
T03228
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
wce
Weissella tructae WS08
Pathway
wce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WS08_0374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wce03400
]
WS08_0374
DNA repair and recombination proteins [BR:
wce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WS08_0374
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WS08_0374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIG65313
UniProt:
A0ABM5QRB8
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All DBs
Position
430495..431277
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AA seq
260 aa
AA seq
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MADVFDAIVMYQRPHKEHDLMVKMLTKDYGKRMFYIRHGKSKRYAYAADVQPFTIGKYEG
SINATGLSFMNDVKQSHMSRTFLEDMHRTAYMTYIMGLVDAAFVDNQPLPAWFDEIALAI
EKMEADFSSAALAHYFELKLLPAFGVHIDWTHCVVCEETTPQMDFSMKLGGLLCAKHFGQ
DEHRMQIVPKALYILRQFSQISLKQMHSLQVKSSTSQEMTRVLDAIYDDQVGIQLKAKSF
INQLQSWESRLQTRQSDANN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtttttgatgcaattgtgatgtatcaacgccctcacaaagagcatgattta
atggttaaaatgctgactaaagattatggtaagcgaatgttttacattcgccatggtaag
tctaagcgctatgcatatgcagcagatgtacaaccgtttacaattggtaaatacgaaggg
tcaattaatgcaactggcttgagttttatgaatgatgttaaacaaagtcatatgtcgcgt
acttttttggaagatatgcatcgcactgcctacatgacttacattatggggttggtcgat
gccgcattcgtggacaatcaacctttgccagcttggtttgatgaaattgcattagcaatt
gaaaaaatggaagcagattttagttcagcggctttagcccattattttgagctcaagttg
ttgcctgcatttggtgtgcatattgattggacgcattgtgtggtgtgtgaagaaaccacg
ccacaaatggatttctccatgaaattaggtggtttattatgtgcaaaacattttggacaa
gacgaacatcggatgcaaatcgtgcctaaggcactgtatattttgcgtcaatttagtcaa
attagcctaaagcaaatgcattcattacaagttaaatcgagtacgagtcaagaaatgaca
cgtgtcttagatgcgatttatgatgaccaagtaggaattcaacttaaagcaaagtcgttt
atcaatcaattacagagctgggaatctcgcttacaaacgcgacaatctgatgcaaataat
tga
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