Weissella tructae WS08: WS08_0490
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Entry
WS08_0490 CDS
T03228
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
wce
Weissella tructae WS08
Pathway
wce02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WS08_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wce03021
]
WS08_0490
Transcription machinery [BR:
wce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WS08_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
WH_Rok
HTH_10
cas_Cpf1_2nd
Motif
Other DBs
NCBI-ProteinID:
AIG65429
UniProt:
A0ABM5QR87
LinkDB
All DBs
Position
564561..565694
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AA seq
377 aa
AA seq
DB search
MTEEKAKNVENFSQADLDKAVKKIIKEFKKDKEIREDLLETTLLNPLKLDETQIEEVYAE
IESSGISIVDEKGEPTERALKNRKTALSAKELKQAADAPTGMKINDPVRMYLKEIGRVSL
LTGEQEVHLAERIEDGDELAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKA
VEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRNLLQDLG
REPTPEEIGAEMDIPTEKVRDILKIAQEPVSLETPIGEEDDSHLGDFIEDNEAISPADSA
AYEMLKVQLESVLDTLTPREEQVLRLRFGLDDGRTRTLEEVGKEFGVTRERIRQIEAKAL
RKLRHPSRSKQLRDFLD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaaaagcaaaaaacgttgagaacttctcacaagcggacttagacaaggcc
gttaagaagattattaaggaattcaagaaagataaagaaatccgcgaagatctattggaa
acaactttgctaaatccattgaagctagacgaaacacaaattgaagaagtctatgctgaa
attgaatcatcagggatttcaatcgttgacgaaaagggtgaaccaactgaacgtgctttg
aagaaccgtaagacagcattgtctgcgaaggaattgaagcaagcagcggacgccccaact
ggtatgaagattaatgacccagtacgtatgtacttgaaggaaattggtcgtgtttctctt
ttgacaggggaacaagaagttcacttggctgaacgtatcgaagatggtgacgaacttgct
aagcaagaacttgccgaagccaacttgcgtttggttgtctcaattgccaagcgttatgtt
ggacgtggaatgcaattcttggacttgattcaagaaggtaacatgggattgatgaaggcc
gttgaaaagtttgattaccgtaagggattcaagttctcaacttacgccacttggtggatt
cgtcaagcgattactcgtgcgattgctgaccaagcgcgtacaattcgtatccctgttcat
atggttgaaacaatcaacaagttgatccgtatccaacgtaacttgctacaagacttggga
cgtgaaccaacacctgaagaaattggggccgaaatggacatcccaacagaaaaggttcgt
gacatcttgaagattgcacaagaaccagtttcattggaaacaccaattggtgaagaggat
gattcacatttgggagactttattgaagacaatgaagctatctcaccagctgattctgct
gcatacgaaatgttgaaggtacaacttgaatctgtattggatacacttacaccacgtgaa
gaacaagtattgcgtttgcgtttcggtcttgatgacggacgtacgcgtactttggaagaa
gtgggtaaggaatttggcgtgacacgtgaacgtatccgtcaaattgaagcgaaggcactt
cgtaagctacgccatccatcacgttcaaagcaattgcgtgatttcttggactaa
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integrated database retrieval system
