Weissella tructae WS08: WS08_0802
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Entry
WS08_0802 CDS
T03228
Name
(GenBank) YhaM protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
wce
Weissella tructae WS08
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wce03019
]
WS08_0802
Messenger RNA biogenesis [BR:
wce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WS08_0802
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Paralog
GFIT
Motif
Pfam:
HD
HDOD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIG65741
UniProt:
A0ABN4DHH0
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All DBs
Position
complement(884888..885835)
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AA seq
315 aa
AA seq
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MDQLKDFKFDEKFDAFVLLKEADVRTTSQGKPYLAVEVADRSMEVRGMLWDINPEETHTL
TPGIVVRISAVKQMYQERPQLKVLAIRPAAVGEPQNPADYMQAAPVRAAEMEEEVSKILF
QILNPTWQRVVRHLVTKYHDAFYQFPAAKSNHHAFAGGLAFHSLSIAHLAEAIVAQYKDV
NASLLYAGALLHDLGKVIELSGPVATKYTTAGNLIGHITLIDEQIVIASQELGLDLYSED
MLVLRHTVLAHHGVLEYGSPVRPLVKEANILHQLDELDAAMQSFDNALSDTEPGTFSGRQ
WALDQRSVYRPNLDN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctaaaagattttaaatttgatgaaaaattcgatgcatttgttttgttaaaa
gaagcggatgtgcgaacaacgagccaagggaagccatatttggcagttgaagtggcggac
cgttcaatggaagtccgcggtatgttgtgggatattaatcctgaggagacacatacttta
acgcccgggattgtagtccgtatttctgcagttaagcagatgtatcaagagcgtccacaa
ttgaaggtgttagccattcgtcctgctgcagtaggagaaccacaaaatccagctgactac
atgcaagcagcacctgtacgggcagctgaaatggaagaagaagtttcaaaaatcttattc
caaattttgaatccgacatggcaaagagtcgtgcgccatttagtaacgaagtatcatgac
gcgttttatcaatttccagcggctaaatcaaatcaccacgcctttgctggtgggttggct
ttccattccctttcaattgcacatttagcagaagcaattgtggcacagtataaagatgtg
aatgctagtctattgtatgcaggtgcactattacatgatttagggaaagtgattgaatta
agtggaccagtcgcgacaaaatatacaaccgccggtaatttaatcgggcatattacattg
attgatgagcaaatcgtgattgcaagtcaagaattaggtttggatctatatagtgaagat
atgcttgttttgcgtcatacggtattagcacatcatggtgtactggagtatggttcacca
gtacgtccgcttgtgaaagaagcgaatattttacatcaattagacgaattggatgctgca
atgcagagttttgataatgctctgtcagacacagaaccagggactttttccggtcgccaa
tgggctttggaccaacgtagtgtttaccgaccaaatttggataattaa
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