Weissella tructae WS08: WS08_1112
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Entry
WS08_1112 CDS
T03228
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
wce
Weissella tructae WS08
Pathway
wce03030
DNA replication
wce03430
Mismatch repair
wce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WS08_1112
03430 Mismatch repair
WS08_1112
03440 Homologous recombination
WS08_1112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wce03032
]
WS08_1112
03400 DNA repair and recombination proteins [BR:
wce03400
]
WS08_1112
Enzymes [BR:
wce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WS08_1112
DNA replication proteins [BR:
wce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WS08_1112
DNA repair and recombination proteins [BR:
wce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WS08_1112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
TIP49
AAA_14
AAA_24
AAA_19
AAA_assoc_2
HAT_Syf1_M
AAA_16
Glyco_tranf_2_5
B12-binding_2
DUF815
AAA_18
Amelogenin
Motif
Other DBs
NCBI-ProteinID:
AIG66051
LinkDB
All DBs
Position
complement(1188142..1189875)
Genome browser
AA seq
577 aa
AA seq
DB search
MAYQALYRTWRPQKFSDLIGQEVVTKTLKNTIESGQITHAYLFNGPRGTGKTSAAKIFAK
AVNCLHPDHGEPDGTCEICLAADAGTLGDVVELDAASNNGVDEIREIREDVNYAPTQAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPQKIPATIISRTQRFDFKRIDA
KASYDRMVHILNARGNAYDESALRVIANAADGGMRDALSILDQVLSFGDGSITLDNALLV
TGSVTQTLLGEYLQAVVAHDTQAALGKLSDVLAAGKDAQRFIEDLISYARDLLLYTEAPD
LITLVPDENFQEMAKSEKPQVWYNMIDVLNDTQQQLRYTNRPSIYLEVLTVKLSQPKQVV
QTVDVAAEPVQNVVAQPAQPAQPAQPAQPAQPAQPAQPAQPVAKAAVSDDKQSVFKVLQS
ATRGDLNRVISIWGDVTNMLPVSQQAMLNVAKPIAASPNGLVVAFDFDVIRMNAMKNAEL
VNTVTQQLRILTESDTERQLIFITADNWPTLRAEFLAQRQAAPAASAPQAADQNEQVQLN
EVVDAGMPEEPTENQAHPAVDEAINLFGSEMVETQED
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaagcattatatcggacatggcgaccacaaaagttcagtgatttaattgga
caagaagtcgtcacgaagacattaaaaaacaccattgagagtggacaaattacccacgca
tatctctttaatggaccgcgtggaactgggaaaacatcagcagccaaaatttttgctaaa
gcagttaattgtttgcatccggatcatggtgaaccggatggtacatgtgaaatttgttta
gcagctgatgctggtacattaggtgatgtagttgaattggatgcggcctcaaacaacggg
gttgatgaaattcgtgaaattcgtgaggatgtgaattacgcacctacacaagcaaagtat
aaggtttacattattgatgaggttcacatgttatcaacaggggcctttaatgccttattg
aaaacattggaagaaccaccagcaaatgtaatctttattttggcaacgacggaaccacaa
aagattcctgccacaatcatttctcgtacgcaacgttttgactttaagcgtattgatgca
aaggcatcttacgaccgtatggttcatattctaaatgcgcgtggtaatgcgtatgatgaa
agtgccctacgtgtcattgcgaatgcagctgatggtggaatgcgtgacgcattgagtatt
ctagatcaagtcttatcattcggggatggttcaattacattggacaatgctttgttggtt
actggatcagttacgcaaacattgttaggtgaatacctacaagcagttgtcgcacatgat
acacaagcagcgttaggtaagctaagtgatgttctggctgcggggaaagatgcacaacgc
tttattgaagatttgattagttatgcacgtgacctcttgttgtatacagaagcgccagat
ttgattacgctggttccggatgaaaacttccaggaaatggccaagtcagaaaagccgcaa
gtttggtacaacatgattgatgtgttgaacgatacgcaacaacaattgcgttatacaaat
cgtccaagtatctacttagaagtgttgactgttaaattgagccaaccaaaacaggttgtt
caaacagttgacgttgcagcagaacccgttcagaatgtggtggcacaaccggcacaaccg
gcacaaccggcacaaccggcacaaccggcacaaccggcacaaccggcacaaccggcacaa
ccggtggcgaaagcagcagtatctgatgataagcaatcagtgtttaaggtgcttcaatct
gcaactcgtggtgatttaaatcgtgtcatttctatttggggtgacgtgacaaacatgttg
ccagtgtcacaacaagcgatgctgaatgttgctaaaccaattgctgcatcaccaaatgga
ttggtagttgcgtttgattttgacgtcattcgaatgaatgcgatgaagaatgcagaacta
gtgaatacggtgacgcaacaattacgtattttgacggagtcagatacagaacgtcaatta
atcttcattacagctgataattggccaacgttacgtgcggaattcctagcacaacgtcaa
gctgccccggctgcatcagcaccacaagcagctgaccaaaatgaacaagtgcaattgaat
gaagtagtagatgcggggatgcccgaagaacctactgaaaatcaggcgcatccagctgtt
gatgaagcaatcaacttgtttggatcagagatggttgaaacacaagaagactaa
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