Weissella confusa: C6P13_01600
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Entry
C6P13_01600 CDS
T05951
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wcf
Weissella confusa
Pathway
wcf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6P13_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wcf03021
]
C6P13_01600
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_01600
Enzymes [BR:
wcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6P13_01600
Transcription machinery [BR:
wcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6P13_01600
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6P13_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QBZ02021
LinkDB
All DBs
Position
318609..319553
Genome browser
AA seq
314 aa
AA seq
DB search
MLEFENPKITLVEEDSNYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAINSVQIDGVL
HEFSTVEGVVEDVTQIILNLKKVSMRIDSDEAKTLEVNVTGPATVTAGDIAGDSDVEILN
KDLHIATVAAGATLHMTLSAERGRGYVSADQNKELHEEMPIGVLAIDSIFTPIERVNYQV
ENTRVGQRDDFDKLTLDIWTDGSLTATEAISLAARIMSDHLNSFVELSERAVNTQVMVDK
EEVPTSKHADTPIEELDLSVRSYNCLKRAGINSVQELTERTETQMMSVRNLGRKSLDEIQ
EKLAVLGLGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaattcgaaaacccaaagattacgctggttgaagaggatagcaattacggtaag
tttgtggttgagccgcttgaacgtggttacggaactactttgggtaactccctacgccgt
gtattgttgtcttcattgcctggtgcggcaatcaattcagtacaaattgatggcgttttg
catgagttttcaacggtcgaaggtgtcgttgaagatgtaacgcaaatcatcttgaacctc
aagaaggtttcaatgcgcatcgatagtgatgaagcgaagacgctcgaagttaacgtaacc
ggtcccgctactgtgacggccggcgacatcgctggagatagtgatgtagagatcttgaac
aaggatcttcacattgccactgttgcggctggggctacgttgcacatgactttgtctgca
gaacgcggacgtggttatgtgtcagcggaccagaataaggaattgcatgaagaaatgcca
attggcgttctagcaattgattcaatctttaccccaatcgaacgcgtaaactatcaagtt
gagaacactcgtgtgggacaacgtgatgactttgacaagttgactttggacatctggact
gatggatcattgactgctactgaagctatttcattggcagcccgtatcatgtcagaccac
ttgaactcatttgttgaattgtcagaacgcgcggttaacacacaagtgatggtagacaag
gaagaagtaccaactagcaagcatgccgacactcctattgaagagttggacttgtcagtt
cgttcttataattgtctcaaaagggccgggatcaactctgtacaagagttgacggagcgt
acagagactcaaatgatgtctgtacgaaacctcggtcggaaatcacttgacgaaatccag
gaaaagctggcagtgctcggtttagggttccgcaaggaagattag
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