Weissella confusa: C6P13_03410
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Entry
C6P13_03410 CDS
T05951
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
wcf
Weissella confusa
Pathway
wcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6P13_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_03410
Enzymes [BR:
wcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6P13_03410
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6P13_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
PIF1
AAA_19
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBZ02349
LinkDB
All DBs
Position
716188..718608
Genome browser
AA seq
806 aa
AA seq
DB search
MYAQVIVDVPAMQTNQPYTYRIPAELADIVVDGMRVVVPFGRGNRLIQGFVVGLVDEAED
ADKLKDIDSVVELTPVLNDELLQLGGWLAETNFSFRISVLQTMLPNVMRAKYSKTLQLVK
PEAIADDAAVALLFADRSEIPFDEHEIEPALLPKLQRLQRQGVLQVGYVVDNRATAKTVL
AMKPTQDADFYDNERRQLRKTAVKQARLLTFLMTAPRDFMPIKTVIDEQHLDYPTIKKAE
EQGWITRDEIEEYRLPRLSSPVAATEALTLNPEQEVAYEAITASLNKAENHTFLLEGITG
SGKTEVYLQSIAHTLANGKTALMLVPEITLTPQMVRRVKGRFGDNVAVMHSGLSDGERYD
EWRRVERHEVQVVVGARSAIFAPLENIGLIVIDEEHEATYKQEENPRYHARDVALWRAEY
HNATVVLGSATPSLESRARAHRGVYTLLTLTERALHNPLPKAEVVDMREAMKAGGDDIFS
PQLLTQLRDRMDKQEQSVLMLNRRGYANFMMCRNCGYTPRCVNCDLALTVHKDTGRLECH
YCGYSEPIPTTCANCGSDRIRPYGTGTQKVEEELQRIMPDARIIRMDVDTTRRKGATDKM
LNDFGEKKADILLGTQMIAKGLDFPDVTLVGVLNADTTLGLPDYRASERTFQLLTQVAGR
AGRADKEGEVVIQTFNPDHYAIQLAKTQDYESFYKQEMNLRHTWQYAPYFYTVQIKIAHE
RQDEAAKVAYQTANWLKRHLASDSVLLGPSTGAIARLKNKYYYRMVIKFKHDDGLEEALT
ELVSAGQRLQKQGVTLTIDRDPVNFI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcacaagtgattgtcgatgtaccggcaatgcagacaaaccagccatatacctac
cgtattccggctgagttagcagatattgtcgttgatggtatgcgcgttgttgtaccgttt
ggccgtgggaatcgcttgattcaggggttcgtcgtcggcctcgttgatgaggctgaagat
gctgacaagttgaaagacattgatagcgttgtggaactaacgccagtcttaaacgatgaa
ttattgcaactgggcggttggctagcggaaacgaatttttcattccgtattagcgtgttg
caaacgatgctacctaatgtgatgcgcgccaagtattcgaagacgcttcagttggttaag
ccagaggcgattgcggatgatgctgccgttgccttgctattcgctgatcgttctgaaatt
ccgtttgatgaacatgagattgaaccagcgctattgccaaagttgcaacgtttgcaacga
caaggtgttttgcaggttggctatgttgtagataatcgcgcaacggctaaaacagttttg
gcaatgaagcctacacaagacgcagatttctatgacaatgagcgtcgtcagttacgcaag
acggcggttaagcaagcacgtttgttgacgttcttgatgacggcaccgcgcgattttatg
ccaattaagactgttatagatgaacaacatcttgactatccaacgattaaaaaagctgag
gaacagggctggattacgcgtgacgaaatcgaagaataccgtttgccacgtttgagcagc
ccagttgctgcaactgaagcattgacgttaaaccccgagcaagaggtggcttatgaggcc
attacggctagcttgaataaagctgagaatcacacctttttgctagaagggattaccggg
tcaggtaagacggaggtctacttgcaaagcattgcgcatacattggccaacggtaagacg
gctttgatgttagtgcctgaaatcacgttgacgccacaaatggtacgtcgtgtgaaggga
cgcttcggtgataatgtcgcagtcatgcactcaggactatcggatggtgaacgctacgat
gaatggcgtcgcgttgagcgccacgaagtacaggtggttgtgggcgcacgttcagcaata
tttgcaccgttggagaacatcggacttatcgtcatcgatgaagagcacgaagcgacttat
aagcaagaagagaacccacgttaccacgcccgcgatgtcgcactttggcgtgccgagtat
cacaatgcaacagttgtcttgggttcagctacaccgtcgctagaaagtcgtgcgcgtgcc
caccgtggcgtttacacgttgctgacgttgacggaacgtgcgttgcacaatccgttgcca
aaggcggaagttgtggacatgcgtgaagcaatgaaggcaggtggggatgatattttctca
ccacaattgttaacacagctccgtgatcgcatggacaagcaagagcaaagtgtcttgatg
ttgaatcgacgcggttatgccaactttatgatgtgtcgcaattgtggttatacgccacgc
tgtgtgaactgtgatttggccttgacggtgcacaaggacacgggccgtttggaatgccac
tactgcggttatagcgaaccaatcccaacgacttgtgccaactgtggttctgaccgtatc
cgtccttatggtacgggaactcaaaaggttgaagaagaattacaacgcattatgcctgac
gcacgtatcatccgcatggacgttgatacaacgcgtcgcaagggtgcaacggacaagatg
ttgaatgattttggtgagaagaaggcggatatcctattgggtacccaaatgattgccaag
ggtctagattttccagatgttacattggtcggcgtactaaatgctgataccacactgggc
ttgccagattatcgtgcctcagagcgtactttccaactactgacgcaagtggctggtcgt
gccggacgtgctgataaggaaggtgaagtggtgattcaaacgtttaatcccgatcactat
gccattcagttagccaagacacaggactatgaatcattctacaagcaagaaatgaatcta
cgtcatacttggcaatatgcgccgtacttctatacagtgcagattaagattgcccacgag
cgtcaagatgaggcagccaaggttgcttatcagacggccaactggctaaagcgccacttg
gcatcggattcagttttactcggtccttcgacaggtgcaatcgcacgtttgaagaataag
tattattaccgaatggtgattaaatttaagcatgatgatgggttagaggaagcgctaacg
gaacttgtttcagccggtcaacgactacaaaaacaaggggttacgttaacgattgatcgt
gacccagtaaacttcatttag
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