KEGG   Weissella confusa: C6P13_03410
Entry
C6P13_03410       CDS       T05951                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
wcf  Weissella confusa
Pathway
wcf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    C6P13_03410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wcf03400]
    C6P13_03410
Enzymes [BR:wcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C6P13_03410
DNA repair and recombination proteins [BR:wcf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C6P13_03410
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Zn_ribbon_PriA Helicase_C PIF1 AAA_19 UvrD-helicase AAA_30
Other DBs
NCBI-ProteinID: QBZ02349
LinkDB
Position
716188..718608
AA seq 806 aa
MYAQVIVDVPAMQTNQPYTYRIPAELADIVVDGMRVVVPFGRGNRLIQGFVVGLVDEAED
ADKLKDIDSVVELTPVLNDELLQLGGWLAETNFSFRISVLQTMLPNVMRAKYSKTLQLVK
PEAIADDAAVALLFADRSEIPFDEHEIEPALLPKLQRLQRQGVLQVGYVVDNRATAKTVL
AMKPTQDADFYDNERRQLRKTAVKQARLLTFLMTAPRDFMPIKTVIDEQHLDYPTIKKAE
EQGWITRDEIEEYRLPRLSSPVAATEALTLNPEQEVAYEAITASLNKAENHTFLLEGITG
SGKTEVYLQSIAHTLANGKTALMLVPEITLTPQMVRRVKGRFGDNVAVMHSGLSDGERYD
EWRRVERHEVQVVVGARSAIFAPLENIGLIVIDEEHEATYKQEENPRYHARDVALWRAEY
HNATVVLGSATPSLESRARAHRGVYTLLTLTERALHNPLPKAEVVDMREAMKAGGDDIFS
PQLLTQLRDRMDKQEQSVLMLNRRGYANFMMCRNCGYTPRCVNCDLALTVHKDTGRLECH
YCGYSEPIPTTCANCGSDRIRPYGTGTQKVEEELQRIMPDARIIRMDVDTTRRKGATDKM
LNDFGEKKADILLGTQMIAKGLDFPDVTLVGVLNADTTLGLPDYRASERTFQLLTQVAGR
AGRADKEGEVVIQTFNPDHYAIQLAKTQDYESFYKQEMNLRHTWQYAPYFYTVQIKIAHE
RQDEAAKVAYQTANWLKRHLASDSVLLGPSTGAIARLKNKYYYRMVIKFKHDDGLEEALT
ELVSAGQRLQKQGVTLTIDRDPVNFI
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtatgcacaagtgattgtcgatgtaccggcaatgcagacaaaccagccatatacctac
cgtattccggctgagttagcagatattgtcgttgatggtatgcgcgttgttgtaccgttt
ggccgtgggaatcgcttgattcaggggttcgtcgtcggcctcgttgatgaggctgaagat
gctgacaagttgaaagacattgatagcgttgtggaactaacgccagtcttaaacgatgaa
ttattgcaactgggcggttggctagcggaaacgaatttttcattccgtattagcgtgttg
caaacgatgctacctaatgtgatgcgcgccaagtattcgaagacgcttcagttggttaag
ccagaggcgattgcggatgatgctgccgttgccttgctattcgctgatcgttctgaaatt
ccgtttgatgaacatgagattgaaccagcgctattgccaaagttgcaacgtttgcaacga
caaggtgttttgcaggttggctatgttgtagataatcgcgcaacggctaaaacagttttg
gcaatgaagcctacacaagacgcagatttctatgacaatgagcgtcgtcagttacgcaag
acggcggttaagcaagcacgtttgttgacgttcttgatgacggcaccgcgcgattttatg
ccaattaagactgttatagatgaacaacatcttgactatccaacgattaaaaaagctgag
gaacagggctggattacgcgtgacgaaatcgaagaataccgtttgccacgtttgagcagc
ccagttgctgcaactgaagcattgacgttaaaccccgagcaagaggtggcttatgaggcc
attacggctagcttgaataaagctgagaatcacacctttttgctagaagggattaccggg
tcaggtaagacggaggtctacttgcaaagcattgcgcatacattggccaacggtaagacg
gctttgatgttagtgcctgaaatcacgttgacgccacaaatggtacgtcgtgtgaaggga
cgcttcggtgataatgtcgcagtcatgcactcaggactatcggatggtgaacgctacgat
gaatggcgtcgcgttgagcgccacgaagtacaggtggttgtgggcgcacgttcagcaata
tttgcaccgttggagaacatcggacttatcgtcatcgatgaagagcacgaagcgacttat
aagcaagaagagaacccacgttaccacgcccgcgatgtcgcactttggcgtgccgagtat
cacaatgcaacagttgtcttgggttcagctacaccgtcgctagaaagtcgtgcgcgtgcc
caccgtggcgtttacacgttgctgacgttgacggaacgtgcgttgcacaatccgttgcca
aaggcggaagttgtggacatgcgtgaagcaatgaaggcaggtggggatgatattttctca
ccacaattgttaacacagctccgtgatcgcatggacaagcaagagcaaagtgtcttgatg
ttgaatcgacgcggttatgccaactttatgatgtgtcgcaattgtggttatacgccacgc
tgtgtgaactgtgatttggccttgacggtgcacaaggacacgggccgtttggaatgccac
tactgcggttatagcgaaccaatcccaacgacttgtgccaactgtggttctgaccgtatc
cgtccttatggtacgggaactcaaaaggttgaagaagaattacaacgcattatgcctgac
gcacgtatcatccgcatggacgttgatacaacgcgtcgcaagggtgcaacggacaagatg
ttgaatgattttggtgagaagaaggcggatatcctattgggtacccaaatgattgccaag
ggtctagattttccagatgttacattggtcggcgtactaaatgctgataccacactgggc
ttgccagattatcgtgcctcagagcgtactttccaactactgacgcaagtggctggtcgt
gccggacgtgctgataaggaaggtgaagtggtgattcaaacgtttaatcccgatcactat
gccattcagttagccaagacacaggactatgaatcattctacaagcaagaaatgaatcta
cgtcatacttggcaatatgcgccgtacttctatacagtgcagattaagattgcccacgag
cgtcaagatgaggcagccaaggttgcttatcagacggccaactggctaaagcgccacttg
gcatcggattcagttttactcggtccttcgacaggtgcaatcgcacgtttgaagaataag
tattattaccgaatggtgattaaatttaagcatgatgatgggttagaggaagcgctaacg
gaacttgtttcagccggtcaacgactacaaaaacaaggggttacgttaacgattgatcgt
gacccagtaaacttcatttag

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