KEGG   Weissella confusa: C6P13_05020
Entry
C6P13_05020       CDS       T05951                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
wcf  Weissella confusa
Brite
KEGG Orthology (KO) [BR:wcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:wcf03016]
    C6P13_05020
Enzymes [BR:wcf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     C6P13_05020
Transfer RNA biogenesis [BR:wcf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C6P13_05020
 Prokaryotic type
    C6P13_05020
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QBZ02642
LinkDB
Position
1050333..1051244
AA seq 303 aa
MDGILPVYKETGMTSHDVVFKLRKILHMKKIGHAGTLDPSVDGVLPVALGKATKTIEFLQ
ESGKIYTGEVTFGFATTTEDLDGEVVESQPLTRPFTDEEIADAMAKLTGDIIQIPPMFSA
VKVNGKRLYEYARAGETVERPERHATIYRFERTSDTTFDAENGTQKFTFVAEVSKGTYIR
TLAVDLGKTLGVPAVMSQLTRQKAGGYDLSQAHSLADIQAMMDETGNVDAWLQPLGSAVA
HYPHVAITDEQWAKVKNGIGLPKDVHEPIDEKIVITHDGDVKSVFEWREDKGQYRPFRTF
SIE
NT seq 912 nt   +upstreamnt  +downstreamnt
atggatggtattttgccagtttacaaagagaccggaatgacgtcacacgatgtggtgttt
aagctccgcaagattttgcacatgaagaagattgggcacgcaggtacgcttgacccctct
gttgatggtgttttaccagtagctttgggtaaggcaacgaaaacaatcgaatttctgcaa
gagtcaggtaagatttacactggtgaagtgacatttggctttgcgacaacgacggaagac
ttggatggtgaagtggttgaatcacaaccattgacgcgtccgttcaccgatgaagaaatt
gctgatgcaatggctaagctaactggtgacattattcaaattccaccaatgttttctgca
gttaaggtgaatggtaagcgcctttatgagtatgcacgtgctggtgaaacggttgagcga
ccagaacgtcatgcgactatctatcgtttcgaacgtacttctgatacgacattcgatgca
gagaacgggacgcaaaagtttacgtttgtggctgaagtttctaagggaacttatatccgc
acgttggccgttgatttgggtaagactttgggcgtgccagcggttatgagccaattgaca
cgtcaaaaggcgggtggctatgacttgtcacaagcccacagtttggccgacatccaagca
atgatggacgaaactggtaatgtagatgcttggttacaaccattgggtagcgcagttgct
cattatccacatgtggcaatcactgatgaacaatgggcaaaggtaaagaatggtatcgga
ttgccaaaggatgtgcatgaaccaattgatgagaagattgtgattacccacgatggtgat
gtgaaatcagtctttgaatggcgtgaggataaggggcaataccgcccattccgaacattt
tcaattgaataa

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