Weissella confusa: C6P13_05335
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Entry
C6P13_05335 CDS
T05951
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
wcf
Weissella confusa
Pathway
wcf03030
DNA replication
wcf03410
Base excision repair
wcf03420
Nucleotide excision repair
wcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6P13_05335
03410 Base excision repair
C6P13_05335
03420 Nucleotide excision repair
C6P13_05335
03440 Homologous recombination
C6P13_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcf03032
]
C6P13_05335
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_05335
Enzymes [BR:
wcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6P13_05335
DNA replication proteins [BR:
wcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C6P13_05335
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C6P13_05335
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6P13_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
QBZ02703
LinkDB
All DBs
Position
1115842..1118556
Genome browser
AA seq
904 aa
AA seq
DB search
MAKPTLLLIDGNSLAFRAFYALINQVDRFVNHEGLHTNALVGFNNLLDGIVDPFKPDLAL
VAWDAGKTTFRTGKFDNYKGNRDKTPQELVEQFEPLRKMVELHGIKSYELPGYEADDIIG
TTARMGEAAGYAVTIVTGDRDMTQLVTDDVSVWVTKKGITEMDHYTPAMVAEVYDGLTAA
QIVEVKGLQGDTSDNYPGVAGIGPKTAIKLMKEYHTIPEMYERIDEMKASKQKEKLVAGK
EDALLSRDLATIRTNAPVDYTLTDLTYQGPDYDAIIPFYQHLDFKAQLVKLANQGHTIPA
PLHDVADEDGDPVHDMSNTALEVRELTATNLTHIEQLGDEVSFYLELDGDNYHTAAPVGF
AIGNNEHGYFVSRDIELLVQGTPVNKLLQDPAIKKNVFNAKETIVALRRLGVTFPAVDFD
LLLVAYLLDTNDNNNDLGALAHENGYYAVRTDEEVYGKGAKFAIPEADEDLFEHLGRKAM
AIQYLKAPLTKKLADHEQTNLYEEIELPLTYVLADMEATGITVDANTLLEMRSKLTERLS
ELEQTIYQQAGHEFNIQSPKQLGVILFEEMGYTPIKKTKTGYSTSVEVLEQMGDVPLVAS
ILEYRQIAKIQSTYVEGLLRVIHGSDSKVHTRYLQTLTQTGRLSSVEPNLQNIPVRIEEG
RRIRKAFIPRQDDWMIFSADYSQIELRVLAHITGDKHLQEAFINGEDIHAATARRIFGLA
PEETVDGNIRRQAKAVNFGIVYGISDFGLAKNIGVSRKQAKQIIDTYFEQYPGVKQWSED
IIASAREKGYVETIAHRRRYLPDIKAKNFNARSFAERTAMNSPIQGSAADIIKIAMINMQ
QAITDAGLQAKMLLQVHDELIFEAPASEIEALHELVPRIMDSAVKLDVPLSVASHEGKSW
YDAK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaacattactattgattgatggtaactcactggcttttcgtgcgttttat
gcactgattaaccaagttgaccgttttgtaaatcacgaaggactgcacacaaacgctttg
gtaggcttcaataacctgttggacggtattgttgatccgtttaagcctgatttggcgttg
gttgcgtgggatgccggtaagacgacattccgtacaggaaagtttgataactataaggga
aaccgtgataagacacctcaagaattggttgaacaatttgagccattgcgtaagatggtt
gaattgcatggtatcaagtcttacgaacttcctggttacgaagccgatgatatcatcggg
acaactgcccgtatgggagaagcagccggatatgcggtgacgattgtgacgggagaccgt
gatatgacgcaattggtaaccgacgatgtttctgtttgggtaactaaaaagggaattact
gaaatggaccactacacaccagccatggttgctgaagtgtatgatggtttgacagccgcc
caaatcgttgaggttaagggccttcaaggtgacacgagtgacaattatcctggtgttgct
ggtatcggtcctaagacagcgattaagttgatgaaggaataccacaccattccagaaatg
tatgagcgcattgatgaaatgaaggcctctaagcaaaaggaaaagttggtcgctggtaag
gaagatgcattgttgtcacgtgacttggccacaattcgcacgaatgcaccagttgattac
acattgactgacttaacttatcaagggccggactatgatgcgattattccgttttatcaa
catctagacttcaaggcccaactagtgaagctggctaatcaaggtcacactattccggca
ccgctacacgatgtggctgatgaggacggtgatcctgttcacgatatgagcaatacagca
ttggaagttcgtgagttaacagctacgaacttgacccatattgaacaattgggtgatgag
gtcagcttttatctagagcttgatggcgataattaccacacagccgcacctgttggtttc
gcaattggtaataatgaacatggctactttgtcagccgcgatattgagttgttggtgcaa
ggtacacctgtcaacaagctgttgcaagacccagccattaaaaagaacgtctttaacgct
aaggaaaccatcgttgcgttgcgtcgtctgggtgtaacgttcccagcagttgatttcgac
ttgttgttagtcgcttacttgctagacacaaatgacaataacaacgatttaggcgcatta
gcccacgaaaacggctactatgccgttcgtactgatgaagaggtttatggcaagggagct
aagtttgccattcctgaagctgatgaggacttgtttgaacaccttggacgcaaagcaatg
gctattcagtacttgaaggcgccgttgactaaaaagttagctgatcatgagcaaacgaat
ttgtacgaagaaatcgagttgccattgacctatgtgctagctgacatggaagctacgggt
attacggtcgatgccaacacgttacttgaaatgcgtagcaagttgacggaacgtttgtca
gaactcgagcaaacgatttatcaacaagcaggtcatgaattcaatattcaatcacctaag
caattaggggtgattttgtttgaagaaatgggctacacgcctattaaaaagacgaagact
ggttattcaaccagtgttgaagtgttggagcaaatgggggatgtccctctagttgcgtca
attttggaataccgtcaaatcgccaagattcaatcaacctacgttgaaggattgttacgt
gtgattcacggttctgattcaaaggtccacacgcgttacctgcaaacattgacgcagact
ggtcgtttgtcatcagttgagccaaacttgcaaaacattccggtgcgtattgaagaaggt
cgtcgtattcgtaaggccttcattccgcgtcaagatgactggatgatttttagtgccgac
tattcacagattgaattgcgtgttttggcccacatcacgggtgataagcacttacaagaa
gcgtttattaacggtgaagatattcacgcagccacggctcgtcgtatctttggtctagcg
ccggaggaaacggttgatggcaacattcgtcgtcaagcgaaagccgtgaactttggaatt
gtttatggtatttctgactttggtttagctaagaacattggtgtgtcacgtaagcaagct
aagcaaatcattgacacgtactttgaacaatacccaggtgttaaacaatggtcagaagac
attattgcgtcagcacgtgaaaagggctatgttgaaacgattgctcaccgccgccgttac
ttgcctgatattaaggcgaagaactttaacgctcgtagttttgcggaacgtacggcgatg
aattcaccaattcagggatcagccgccgacattatcaagattgcaatgattaacatgcaa
caagccattactgatgccgggttgcaagctaagatgttgcttcaggtgcacgacgaattg
atcttcgaggctccggcaagcgaaattgaagcattgcatgagcttgtgccacgcatcatg
gattctgctgttaagttggatgtgccactatcagttgctagtcacgaaggtaagagctgg
tacgacgctaagtaa
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