KEGG   Weissella confusa: C6P13_06095
Entry
C6P13_06095       CDS       T05951                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
wcf  Weissella confusa
Brite
KEGG Orthology (KO) [BR:wcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wcf03400]
    C6P13_06095
Enzymes [BR:wcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     C6P13_06095
DNA repair and recombination proteins [BR:wcf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C6P13_06095
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII AAA_22 DEDDh_C RNase_H_2 Helicase_C Rv2179c-like
Other DBs
NCBI-ProteinID: QBZ02842
LinkDB
Position
complement(1253028..1255847)
AA seq 939 aa
MLNRDIYAVVDLETTRTTSESGRIIQIAVAFVQNKKVINQFSTLVNPGEQIPRNITQLTG
ITQSMVKGAPFFEDVAMTLHAMLQGTIFVAHNVNFDLPFLNAEFERVGLTGLKSTALDTV
PLSQILWPTAPGYRLVDMTNYLALEHSHPHQADSDALATADLLIAILNRAEGLPMLTLQT
LADLPLVLPRDTKTVFEKALAKNQAQPQPLPAHLQVIDGLALRRFSDPAPLVTGHAPAFP
AKKAAKEQLYGKELAYREQQAKLMNAIYTHYTEADLSNEPGKTAFVAEAPTGMGKTLAYL
LPYAYLADEQQKQVVVAVPTITLQQQVTDTINTTLKDILPFEVRGASLKGRTHYLNLQSF
KRALRVDEGSTSLQFIKAQILVWLTETLSGDFDELNLINPQPDFMAKLSQPANNPAGSPY
YGHEFSERQHVLAENAQFLVVNHAYLAEYAQELGTTEDSPYLVIDEAQNLPNAVLEQSRH
QLPFQVWLTRVQNATNLILRDNDPSIGVILNRLVGGQQLKSRFLQQLEVLSSELPKLQVA
FYRRFLLNGHTPATEGHYEVELPISELAQFWVDQGHHLTSMRRAVRDLGESMDYLLEQFS
NTKDAFSLNERQHLADFRRLLESIAKYEQRLTTFQQDLVDFPDASVFWLTENQNHDSSNL
RLSGGLLHTLDFFKDKVYPHFMPPTIVGATLFTSTKSGYLYDRLNIDRDTVFARRYPEVF
DFKNQAELVMVENAPSPTDSGYVSYLAKQLVQLTTTVQENTLVLFNSLDTIQQVYNHMQS
NQTWQQGNMTLLAQGVTGTRSKIMKRLQNESHMVVLGANSFWEGVDLPGDQLRMVVIARL
PFDQPNSVLARAEEAVLMAHGKQPFYQSTLPKAVLRLRQGVGRLIRKPDDFGAVVIYDPR
ILTKSYGKTLRNMLPEEMPQYTLADNEVVPKVKRFFDAH
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgctaaatcgagacatctatgcggttgtcgatctagagacaacccgtacaacgagcgaa
tcgggccgaatcattcagattgcggtcgcattcgtacaaaataaaaaagtcattaaccaa
ttttcaacgttggttaaccctggcgagcaaattccacgtaacattacccaattaacgggt
atcacacaaagtatggtgaagggggcgcctttttttgaggacgtcgccatgacgctacat
gctatgctacaaggcacaatttttgtggcccacaacgttaactttgatttgccgtttttg
aacgctgaatttgagcgtgtgggattaacgggattgaagagtactgctttggatacggtg
ccgctaagtcaaattttgtggcccactgcaccaggatatcgtttggttgatatgaccaac
tacctagcgttggaacacagtcacccgcaccaagcggacagtgatgcgttggcaacagct
gatttgcttattgcgattttgaatcgggctgaaggtttgccaatgttgacactacaaacg
ttggctgatttgccactggttttgccacgtgacacgaagacggtatttgaaaaggccttg
gccaagaatcaagcccagccacaaccattaccagcgcacttgcaagtgattgatggatta
gcattgcgtcgtttctctgatccggcaccgttggtcacaggacatgcaccggctttccca
gctaaaaaagctgcaaaagaacagttgtatggcaaagaactggcgtaccgtgagcaacaa
gcaaagttgatgaatgcgatttacacgcattacacagaagctgatttatcaaatgaacct
ggtaagacggcatttgttgctgaggcaccaacgggaatgggaaagacgttggcttacttg
ttgccatatgcttatctagcggatgaacaacagaagcaagtggttgttgctgtgccaaca
attacgttgcaacaacaagtgaccgatacgattaatacgacgttgaaggacattttgcca
tttgaagtacgtggggcgagcctgaagggacgtacgcactacttgaatttgcaaagtttc
aagcgtgctttgcgcgtcgacgaaggatcaacatcattgcaatttatcaaggcacaaatc
ttggtttggctaactgaaaccttgagcggtgactttgacgaattgaatttgattaatccg
cagccagactttatggctaagttgtcacaaccggccaataatccagctgggtcaccttac
tatggacacgaatttagcgaacgtcagcatgtcttggctgagaatgcacaattcttggtt
gttaatcatgcgtacttggctgaatatgcacaagagctgggaacgactgaagattcaccg
tacttggtgattgacgaagcccagaacttgccaaacgctgttctagaacaaagccgtcac
caattgccattccaagtttggttgacgcgtgttcaaaacgcgacaaatttgattttgcgt
gataacgatccctcaattggggtgattttgaaccgcttagtcggtgggcaacaattgaag
tctcgtttcttgcagcagttggaagtactctcaagtgagttgccaaagttacaagttgcg
ttctatcgtcgtttcttgctcaatgggcatacgccagcgacggaaggtcactacgaagtg
gaactaccgatttctgagttggcgcagttctgggttgaccaagggcaccacctaacgagt
atgcgtcgtgcagtccgtgatttgggcgaatcgatggattatttgttggagcaattcagt
aataccaaggacgcattttcattgaatgagcgtcaacatttggcggatttccgtcgtttg
ctagagagtattgcgaagtatgagcaacggttgacgacgtttcaacaagatttggttgat
ttcccagatgcgagtgtcttctggctaacggaaaatcaaaaccatgacagcagcaacttg
cgtttgagtggtgggttgttacacaccttggatttcttcaaagacaaggtttatccgcac
tttatgccaccaaccattgtcggggcaacgttgtttacatcaacgaagtcaggttaccta
tatgatcgtttgaatattgatcgtgatacggtatttgctcgtcgttaccctgaagtgttt
gatttcaagaatcaagctgaattggtaatggttgagaatgcgccgtctccaactgattca
gggtacgtcagctatttggccaagcaattggtgcaattgacgacgacggttcaagaaaac
acgctggtgctgtttaattcgttagacaccattcagcaagtctataatcacatgcagtca
aatcaaacttggcagcaaggaaatatgacgttgttggcacaaggtgtgacggggacgcgc
agcaaaattatgaagcgcctgcaaaacgaatcacatatggttgttttgggtgccaatagt
ttctgggaaggtgtcgacttgcctggtgatcaactccggatggtcgtgattgcgcgacta
ccatttgaccaaccaaatagcgtgctagctcgcgccgaagaagcggttttgatggcacac
ggtaagcaaccgttctatcaaagtacgttgccaaaggcggtactacgtttgcgccaaggt
gtcggtcgtttgattcgcaagccggatgattttggtgctgtggtgatttatgacccacgt
atcttgacgaagtcttacggaaagacgttgcgaaatatgttaccggaggaaatgccacaa
tatacgttggctgacaatgaagttgtcccaaaggtgaagcgattttttgatgcgcattaa

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