Weissella confusa: C6P13_06350
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Entry
C6P13_06350 CDS
T05951
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
wcf
Weissella confusa
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcf03032
]
C6P13_06350
03036 Chromosome and associated proteins [BR:
wcf03036
]
C6P13_06350
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_06350
DNA replication proteins [BR:
wcf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C6P13_06350
Chromosome and associated proteins [BR:
wcf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C6P13_06350
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C6P13_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
QBZ02892
LinkDB
All DBs
Position
complement(1309075..1309350)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQDLVEKVVLSTNFTKKDANEAVDAVFAAIQEFLAKDEKVQLIGFGNFEVRERAARK
GRNPQTGEEIEIAASKIPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaagcaagatttggtagaaaaggttgttctttcaactaactttacgaagaag
gatgcaaacgaagctgttgatgcagtattcgccgcaatccaagaattccttgcaaaggat
gaaaaggttcaattgatcggcttcggtaacttcgaagttcgtgagcgcgctgctcgtaag
ggtcgcaacccacaaactggtgaagaaatcgaaatcgcagcttcaaagattcctgcattc
aagcctggtaaggccttgaaggatgccgtgaagtaa
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