Weissella confusa: C6P13_06820
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Entry
C6P13_06820 CDS
T05951
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcf
Weissella confusa
Pathway
wcf03420
Nucleotide excision repair
wcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6P13_06820
03430 Mismatch repair
C6P13_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_06820
Enzymes [BR:
wcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6P13_06820
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6P13_06820
MMR (mismatch excision repair)
Other MMR factors
C6P13_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
DEAD
SLFN-g3_helicase
AAA_16
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QBZ02984
LinkDB
All DBs
Position
complement(1405526..1407808)
Genome browser
AA seq
760 aa
AA seq
DB search
MEPYEAEQQRLDVVLEKIQDAKVKNDLDRQNNEQKQADVEAGWNDVRFKSSTYGSLFETA
MSVRQQQQMLQERELAMNSVEHQAVVLDRLQARPYFARIDVQENGSETVEPIYIGLASFS
DSPDNFLIYDWRAPISSIYYDAGLGQVTYETPDGKQEATVHLKRQFQIEDGKIVTIFDTD
EAVGDQMLLNAVSGESTTKMKSIVTTIQKEQNKIIRNTAADLLFVQGAAGSGKTSAVLQR
VAYLLYRYRGHLTSGQVVMFSPNQLFNDYIDQVLPELGEQNMVQMTYYQYASRRLPKLQL
ETLQERFEAQPEGAQKAIIDMKGTSDYFNAMNAYADGLNKADIKVRPIKFRGQEIISKAK
IEEIYYSFNENYKSGNRLQATKERLMKMLQGRIGTEMQADWVEAEIQNLTKEQYDSMLGD
NPREFKSDEEETKFLAKIIVTNALAPIAKGVNRNRFININNQFIHFLRTVPKLMDLSAYG
ITLDDWQKSVENTINKMKNGELPMADMTPFMLLFDLIKGSRGERDIRFVFIDEIQDYTPF
QLAFLKFSFPRARFTMLGDLNQAIFTKENAVSLQEELSHLFDPEKSEYVQLTQTYRSTQQ
ITDYSKAILINGAQIDAFEREGDKPLVKVLPDQDAMIAAALSQLAANDAAEETTAIITKT
LADAEAAYAALRDQADVTIIRTENQRLVPGTIIVPAYLAKGLEFDAVIMWDASEGVYHGD
DERQLVYTIASRAMHQLTVLAINKLTPLLANVDSQLYEMG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatacgaagccgagcaacaacgcttggatgtggtcttggaaaagattcaagac
gcaaaggtaaaaaatgatttagatcgacaaaacaacgagcaaaagcaagctgatgttgaa
gctggatggaacgacgtccgcttcaagtcatctacttatggtagcttgttcgaaacggcc
atgtctgttcgccaacaacaacaaatgttgcaagaacgcgaattggcgatgaactcagtt
gaacaccaagccgtggtattggaccgcttgcaagctcgtccatactttgcccgtattgat
gtgcaagaaaacggttctgagacggttgagccaatttatattgggctggcatcattttca
gattcaccggacaatttcttgatttatgactggcgtgcaccaatttcttctatttactat
gacgctggtttgggtcaagtgacgtatgagacgccggatggtaagcaagaggcaacggtt
cacttgaagcgtcaattccaaattgaagacggtaagattgtcacaatttttgacacagac
gaagcggttggtgaccaaatgttgttgaacgccgtttcgggtgagtcaacgacgaagatg
aagtcaatcgttacgacgattcaaaaggaacaaaacaagattatccgtaacacggcagct
gatttgttgttcgtgcaaggagccgctggttctggtaagacatctgccgtgctacaacgc
gtggcctacttgctataccgttaccgtggtcacttgacgtctggtcaagttgtgatgttc
tcaccaaaccaattgtttaatgactatatcgaccaagtgttgcctgaattgggtgagcaa
aacatggtgcaaatgacgtactaccaatatgcatcacgtcgtttgcctaagttgcagctt
gagacactacaagagcgtttcgaagcgcaaccagaaggcgctcaaaaggccatcatcgac
atgaagggtaccagtgactacttcaacgcgatgaatgcatacgctgacggtttgaacaag
gccgacatcaaggtgcgcccaattaagttccgtggtcaagaaatcatttcaaaggccaag
attgaagagatttactactcattcaacgagaactacaagtcgggtaaccgtctccaagca
accaaggaacgtttgatgaagatgttgcaaggccgtatcgggacggaaatgcaagcggac
tgggttgaagctgaaatccaaaacttgacgaaggaacaatacgactcaatgttgggggac
aacccacgcgagtttaagtctgatgaagaagagacaaagttcttggccaagattattgtg
acgaatgctttggcaccgattgctaagggtgttaaccgcaaccgtttcattaacattaat
aatcaattcattcacttcttgcgtacggtgccaaagttgatggacttgtctgcatacggc
attacgttggatgattggcaaaagtctgttgagaacacaatcaacaagatgaagaatggt
gaattgccaatggctgatatgacaccatttatgttgttgtttgacttgattaagggtagc
cgtggtgagcgtgatatccgatttgtcttcattgatgaaattcaagactacacgccattc
caattggccttcttgaagtttagcttcccacgtgcgcgctttacgatgctgggtgacttg
aaccaagccatctttacaaaggaaaatgccgttagcttgcaagaagagttgtcacacttg
tttgatccagagaagtctgagtatgtgcaactgacgcaaacataccgttcaacgcaacaa
attaccgactactcaaaggcaatcttgattaacggtgcgcaaatcgatgccttcgaacgt
gaaggtgacaagccactggttaaggtattgccagatcaagacgcaatgattgcggctgcg
ttgtcacaattggcagctaatgatgcagctgaagagacgacggcaatcatcactaagaca
ttggctgacgcagaagctgcttatgctgctttgcgtgaccaagccgatgtcacaattatt
cgtactgaaaaccaacgcttggtaccaggaaccatcattgtgcctgcatacttggctaag
gggctagaatttgatgctgtcattatgtgggatgcctcagaaggggtatatcacggtgat
gacgagcgtcaactggtttacaccattgcatcacgtgctatgcaccaattgacggttctt
gcgattaacaagctaacaccattgttggcaaacgtggattcacaactttacgaaatgggg
taa
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