KEGG   Weissella confusa: C6P13_07875
Entry
C6P13_07875       CDS       T05951                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
wcf  Weissella confusa
Pathway
wcf03030  DNA replication
wcf03430  Mismatch repair
wcf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C6P13_07875
   03430 Mismatch repair
    C6P13_07875
   03440 Homologous recombination
    C6P13_07875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wcf03032]
    C6P13_07875
   03400 DNA repair and recombination proteins [BR:wcf03400]
    C6P13_07875
Enzymes [BR:wcf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C6P13_07875
DNA replication proteins [BR:wcf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C6P13_07875
DNA repair and recombination proteins [BR:wcf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C6P13_07875
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C VacA
Other DBs
NCBI-ProteinID: QBZ03176
LinkDB
Position
complement(1640039..1640572)
AA seq 177 aa
MNFVAMDFETASAQRHSAVSMALVVVRDNVLVDEFYTLIKPESYFDARNTKIHGITEEDV
ADAPKFPAVWDHIKQFYTPNQLVIAHNAPFDNGVLRETLGHYGISAPHYLSLDTVRTSRK
LYPQLPNHKLNTVAAALNIDLEHHHNALDDTVAAARILVTQAEQFGVDPLKQLVKVI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaattttgtcgcaatggactttgaaacagcgagtgcacagcgtcatagtgccgtttca
atggcacttgtggtggtgcgcgacaatgtactcgttgatgaattttatacgttaattaag
ccagaatcgtatttcgatgcgcgtaataccaagattcacgggattactgaggaagatgtt
gcggatgcacctaagtttccagcggtctgggatcacatcaagcaattttatacgcctaat
caattggtgattgcacacaatgcgccatttgataacggtgttttgcgtgagacgttagga
cactacggtatttcagcaccgcattatttgtcactcgacacggtgcgtacttcacgcaag
ttgtacccacagctaccaaatcacaagctgaatacagttgcagcagccctgaatattgat
ttggaacaccaccacaacgctttggatgatacggttgcagcggcgcgcatcttagtgacg
caagctgagcagttcggtgttgatccattgaaacaattagtaaaagttatttag

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