Weissella confusa: C6P13_09295
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Entry
C6P13_09295 CDS
T05951
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcf
Weissella confusa
Pathway
wcf03420
Nucleotide excision repair
wcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6P13_09295
03430 Mismatch repair
C6P13_09295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcf03400
]
C6P13_09295
Enzymes [BR:
wcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6P13_09295
DNA repair and recombination proteins [BR:
wcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6P13_09295
MMR (mismatch excision repair)
Other MMR factors
C6P13_09295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
DEAD
NACHT
AAA_16
SLFN-g3_helicase
HMG_CoA_synt_C
YAcAr
Motif
Other DBs
NCBI-ProteinID:
QBZ03436
LinkDB
All DBs
Position
complement(1943695..1945995)
Genome browser
AA seq
766 aa
AA seq
DB search
MHADQPAEQKRLDKVVVEIDGQLERAKEAYAQAHSETRAVEGNYIANTSINTFEVDDAME
TNAEIQQQRNIVARVTETENIMRKTVDTLTMLRPSPYFGRVDIDEDGDEDTLYIGLASVQ
DKIGDFLVYDWRAPISGIYYNGTLGAVTYPTPMGDQEAELLKKRQFTIEDAQIVNMFDTN
ETVGDEMLQYALGQENDLTMRNIVATIQQEQNQIIRDTTSDLLVVQGVAGSGKTSAILQR
IAFLLFHAREELNSDQIVLFSPNRLFSSYIADVLPSLGERNMRQVTLAEFFSARLQGLQV
QTLFERYEIGHSEATTASLKVREKLESARVVDDLTAFVEQLTPDTLRFDNIYFEDEVFFG
KEAMTRVFAEFSENYSVRERIQMTQKRFMERLERRIDQLVNEDWVLEELNNLDDQQYRDL
LGDELAEQVAEEEEMGYAINIAAKRLLQREFQVVDDALYNMHFFDIYNQYGDFLAYMAEH
SELDTEWWLAKRDRFLRELEYHRIDLEDAAPMLFLRDLITGGGTNKSMFYVFVDEMQDYS
MAQLLYLKHAFPAAKFTVLGDAEQALFRDVETPAALLAKYSQAFKATHPNLITLNKAYRS
TQEIMDFAKALLPDGDNIMAFTRPGGKPKLIVTTADEEEQVIWQAVDELKAEHRTVAILT
KTQDQAEAVARMLRKYPEKFQLLQASDRTRTSNFVVMPIYLAKGLEFDAVIGYDVSQTNY
PDSEATGLLYTLASRAMHALTLISVGPVSGLIRDVQETLDISVLGD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcagaccaacccgctgaacaaaagcggctcgataaagtggttgtcgaaatcgac
gggcaactcgaacgtgctaaggaagcctatgcgcaagctcactcagaaacacgtgccgtt
gaaggaaattatattgccaatacatcaattaataccttcgaagtcgatgacgcgatggaa
acgaacgccgaaattcaacagcaacgtaacatcgtggcccgtgtaactgaaactgaaaat
attatgcgaaagacggtcgatacattaaccatgctccgacctagtccgtattttggacgt
gtcgatattgatgaagacggtgatgaagataccctatacattggtttggcatcggtacag
gataaaatcggcgatttcctcgtttatgattggcgtgcaccgattagcggaatctactac
aacggaacgctcggtgccgtgacgtatcccacaccaatgggtgaccaagaagccgaattg
ctcaagaagcgtcaatttacgattgaagatgcgcaaatcgtcaacatgtttgataccaat
gaaacggttggcgatgaaatgttgcaatatgctttgggacaagaaaatgatttgaccatg
cgcaatattgtggcgacgattcaacaagaacaaaatcaaattattcgtgacacgaccagt
gatttgctggttgtgcaaggtgtggctggatctggaaagacatctgcaattttgcaacgt
atcgcgtttttgctgttccacgcgcgtgaagagttgaattctgaccaaattgtactgttc
tcacccaaccgtttattctcaagttatattgcggatgttttgccatctttgggtgaacga
aacatgcgccaagttacactggcggaattctttagtgcgcgtctacaaggactgcaggtt
caaacgctctttgaacgttatgaaattggtcacagtgaagcgacgacggctagtcttaag
gttcgtgaaaaattggaaagtgcgcgtgttgttgatgatttaacagcctttgttgaacaa
ctcacaccagatacgttgcgctttgacaacatctactttgaagatgaagtgttctttggt
aaagaagcgatgacacgtgtgtttgctgagttctcagagaattactcggttcgtgaacgt
attcaaatgacacaaaagcgtttcatggagcgtttggaacgtcgtattgatcaattggtc
aacgaagactgggtgttggaagagctgaacaacttggacgaccaacagtatcgtgatttg
ttaggtgacgaactggctgagcaagttgctgaagaagaagagatggggtatgccatcaac
attgcggctaagcgtttattgcaacgtgaattccaggttgttgatgatgcgttgtacaac
atgcacttctttgatatttataatcaatacggcgactttttggcttacatggctgagcat
tctgagttggatactgagtggtggctagcaaagcgtgaccgcttcctccgcgagttggag
taccaccgcattgatttggaagacgcggcaccaatgctgttcttgcgtgatttgattacg
ggtggtggtacgaacaagtcgatgttctacgtcttcgttgatgaaatgcaagactacagt
atggctcaattgttgtacttgaagcacgctttcccagctgctaagtttacggtgttggga
gatgctgaacaggctttgttccgagatgttgagacaccggcagctttgttggctaagtac
agccaggcctttaaggcaacacaccctaatttgattaccttgaacaaggcttaccgttca
acgcaagaaattatggactttgccaaagcattgttgccagatggtgataacatcatggcg
ttcacccgaccaggtgggaagcctaagctaattgtcacgacggcggacgaagaggaacaa
gttatttggcaggctgtcgatgaactcaaagcagaacatcgaacggtcgcaattttgact
aaaacacaagatcaagccgaagctgttgcccgcatgctacgcaagtatcctgagaagttc
caattacttcaagctagtgatcgcacacgaacatctaatttcgtggtgatgccaatctat
ttggccaagggattggaattcgatgcagtcattggatacgacgtttcacaaactaattat
ccagatagtgaagcgaccgggttgttatataccttggcatcacgcgccatgcacgcgttg
acgttgattagcgtggggccagtttcaggtttgattcgcgacgtgcaagagacgttggat
attagtgttttaggcgattaa
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integrated database retrieval system
