Waddlia chondrophila: wcw_0012
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Entry
wcw_0012 CDS
T01255
Symbol
ispA
Name
(GenBank) putative geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
wch
Waddlia chondrophila
Pathway
wch00900
Terpenoid backbone biosynthesis
wch01100
Metabolic pathways
wch01110
Biosynthesis of secondary metabolites
Module
wch_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
wcw_0012 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
wch01006
]
wcw_0012 (ispA)
Enzymes [BR:
wch01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
wcw_0012 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
wcw_0012 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
wcw_0012 (ispA)
Prenyltransferases [BR:
wch01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
wcw_0012 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADI37389
UniProt:
D6YTC8
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All DBs
Position
complement(6560..7507)
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AA seq
315 aa
AA seq
DB search
MLSLPQCFWISLSRNENEDGKMMKKSIETNSLLTAYVKKVDTAIENHLDLLGPPSPVRDA
CAYALSTGGKRVRPSITLMVADALGGMGDVTLSALSIEYFHTASLVVDDMPSMDNDDERR
SQPSVHKKFGEAAALLVSYGLIGAGYGMIAENGRLLLDQNIFFADSVDLRCRLALENASF
NTGLNGATGGQFLDIRPPDLSTETLKKIIHMKTSSLFEVAFVNGWLFGGGALEKLDQVKQ
AAAHFGLAFQIADDLGDMEQDLRNKREVNLANVFSKDKAVDMFHGELQSFHLILKDLGLD
EEFFSVLTDSLKASF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttatccttgcctcaatgtttctggatatctctctcccggaacgaaaatgaagatgga
aaaatgatgaaaaaaagtattgaaactaactcgttattaacggcatatgtgaaaaaagtc
gatacagcgatcgaaaatcacctcgatttattaggacctccatctcctgtccgagacgct
tgtgcgtatgcgctttctaccggaggaaaaagggttcgtccctcgatcaccttgatggtt
gccgatgctttgggaggaatgggggatgtaacattaagtgctttaagcattgagtacttt
catacagcttctttggtcgttgatgatatgccttccatggataatgatgacgaaaggcgt
agtcaaccttctgttcataaaaagtttggggaagctgcggctttgttggtcagctatggt
ttaattggcgcagggtatggcatgatcgctgaaaacgggcgtttgctgcttgatcaaaac
attttctttgccgactcagtggatttgcgttgtcgattagctcttgaaaacgcttcgttt
aatacaggtcttaacggggcgacaggcggtcagtttcttgacattagacctcccgatcta
tcgaccgaaacattgaagaaaatcattcatatgaaaacttcttcacttttcgaggtggca
tttgtgaatggttggctttttggcggtggagcccttgagaagcttgatcaagtcaagcaa
gctgcggcccatttcggccttgcttttcaaattgctgacgacttgggagatatggagcag
gatctcaggaacaagagggaggttaacttagcgaatgtatttagtaaagataaggctgta
gatatgttccacggggaacttcagtcttttcatcttatattaaaagacttaggtcttgat
gaggagttttttagtgttttgacagattctttgaaggcctccttttag
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