Waddlia chondrophila: wcw_0162
Help
Entry
wcw_0162 CDS
T01255
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
wch
Waddlia chondrophila
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wch03009
]
wcw_0162
Enzymes [BR:
wch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
wcw_0162
Ribosome biogenesis [BR:
wch03009
]
Prokaryotic type
ribosomal protein modification factors
wcw_0162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
GcpE
Motif
Other DBs
NCBI-ProteinID:
ADI37537
UniProt:
D6YTS6
LinkDB
All DBs
Position
174199..175575
Genome browser
AA seq
458 aa
AA seq
DB search
MLKMHKQERGVAASPNFSLGGNKISFISLGCPRNLVDSEVMLGILLKAGYEPSQTLEEAD
HIVINTCGFLKASRDESLQTINDALKQRKEGAKVIVTGCMVQSHKEMITSPVDYFLGSGD
VEGILDAVRSGEKGEQVTSAKSYLEAGEVPRTISTPNHYAYLKIAEGCRKQCAYCIIPTI
KGRLKSKPAAQVLKEFRVLLNQGAKEVILIAQDLGDWGKDIGFKRTDGLIHLLKELLKVE
GDYWLRLMYLYPDEITGELIQLMKEEPRICPYVDMPIQHVNDNMLKSMHRATHRAQIIGT
IETMRKQIPDISIRTSLIVGFPGETEEQFLELAQFLEEQRLDNVGVFQFSREPGSHAYGL
PEQIAEEVKQDRYDRLMQIQQHVVEQEMRKWVGRVLDVVIEGYHPETRVLMVGRHRGQCP
EIDGQVLINDSRGVDAFGKRYRVEITDISGYDLVGRVI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatgcataagcaggaaagaggtgtggcagcttctccgaatttttcccttgga
ggcaataaaatttcctttattagccttggatgtccccgtaatttggttgatagcgaggtg
atgctgggcattttgctgaaggcagggtacgaaccttcgcaaacgcttgaagaagctgat
catattgtgatcaatacatgcgggtttttaaaagcgtcgcgcgacgaatcgcttcaaacg
atcaatgatgctctgaaacagcgcaaagagggagctaaagtgattgttacagggtgcatg
gttcaaagccataaagagatgattactagccccgttgattattttttgggttctggtgat
gtcgaggggattttagatgctgtgcggtccggagaaaaaggggaacaggtgacaagtgca
aaaagctatctggaggcaggagaagttccacgaactatttccacgccgaatcattatgcc
tacttgaagatcgctgaagggtgccgcaaacagtgcgcctactgcattatcccgacgatc
aaagggcgtttgaagagcaagcccgccgcacaagttctcaaggagttccgcgttcttttg
aaccagggagccaaagaggtgatcttgattgcgcaggatttaggcgactggggaaaggat
atcggattcaagcgcacggacgggctgatccatttattaaaggaattgttgaaagtggaa
ggagattactggctgcgtttgatgtatctttatcccgacgagattacaggtgagttgatc
caattgatgaaagaagagccccgtatctgcccctatgtcgatatgcctatccagcatgtg
aatgacaacatgttgaaaagcatgcaccgcgcaactcatcgagcgcagattatcgggaca
attgaaaccatgcgaaagcagattccggacatctctatccgcaccagcttgattgtcgga
tttcctggagaaactgaagagcagtttctggaattggctcagtttttagaagagcagcgt
ttggataacgtgggagtgtttcaattctcccgagagcccggcagccatgcctacggtctt
ccagaacagattgctgaggaagtgaagcaggatcgatacgatcggttaatgcagatccag
caacatgtcgttgaacaagagatgaggaagtgggtcgggcgtgtcctagatgtagtcatt
gaaggctaccatcccgagacacgtgttttgatggtaggccgccaccgcgggcagtgtcca
gaaattgatggacaggtgctgatcaatgattccagaggcgtcgatgcttttggaaagcgg
tatcgagtggaaatcacagacatttccggctacgatcttgttggcagggtaatttaa
DBGET
integrated database retrieval system
