Waddlia chondrophila: wcw_0420
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Entry
wcw_0420 CDS
T01255
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
wch
Waddlia chondrophila
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wch03400
]
wcw_0420 (sbcD)
DNA repair and recombination proteins [BR:
wch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
wcw_0420 (sbcD)
Archaeal homologous recombinant proteins
wcw_0420 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
RESC9_N
Motif
Other DBs
NCBI-ProteinID:
ADI37792
UniProt:
D6YUI1
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Position
460309..461538
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AA seq
409 aa
AA seq
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MRVLHTSDWHIGRTLYGRKRYEEFEAFLAWLAETIQQNEIDTLLVAGDVFDTSTPSNRAQ
ELYYRFLCRVAASSCRHVVVVAGNHDSPSFLNASKELLKALDVHVVGSSTESPEDEVLVL
RNEQDAPELIICAVPYLRDRDIRVAEAGESVEDKERKLIDGIRTHYATVASLAEQRREEL
GADIPIIGMGHLFTAGGQTVDGDGVRELYIGSLAHVTAGIFPTCFNYLALGHLHIPQKVN
GSETIRYSGSPLPMGFGEAKQQKSVCQVEFHSTTASVQLIDVPVFQKFERVKGDWDDILN
RIIELSATDFQGWLEVIYDGIEVIGNLSERLEVAISGTQMEILRIKNNRVIDRVLERIHE
EETLDDLNVNDVFERCLAVHEVSEEQRPELLRTYQETILSLYEDDLQAD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcttcacacatccgactggcacattggccgcaccctctacggcagaaaacgc
tacgaagaattcgaagcctttctggcctggctagcggaaacgattcagcagaatgaaatt
gatacgctgctcgtggcaggtgatgtctttgacaccagtactccgagcaatcgcgcccag
gagctttattaccgctttttatgccgtgtagccgcctcatcctgtcggcatgttgttgtc
gtcgcgggcaatcacgattcaccgtcctttctcaatgcttccaaggaactgctcaaagct
ttagatgtccacgtggtcggtagtagcacggaatccccggaagacgaagtgctggtgctc
cgtaacgagcaggacgctccggaattgattatctgtgctgtgccttaccttcgcgacagg
gatatccgtgtggcggaagcgggtgaaagcgtcgaggacaaagagcggaaattaattgac
ggcatccgtactcattacgccactgttgcctccctggcagaacagaggcgagaggaactc
ggggccgatattcccattattggcatggggcatctgttcactgcaggcggccaaactgtc
gatggtgatggcgtgcgcgaactctacatcggctccttggctcatgtgacagccggaatt
tttcctacctgtttcaactatctggcgcttggtcacctccatatcccgcaaaaagtgaac
ggctccgaaactataaggtacagcggctctccattgcccatgggatttggagaggcaaaa
cagcagaagagtgtttgtcaggttgaattccacagcacgaccgcatccgtacaactgatc
gacgtgccggtgtttcagaaattcgagcgcgtcaagggagactgggatgacatcttaaac
cgcatcatcgaattgtcggcaaccgactttcaaggttggctcgaagttatttatgatggc
attgaggttattggcaatctgagtgagcgtctggaggttgcgatttccggcactcaaatg
gaaattctacggataaagaacaaccgcgtcatcgaccgcgttctggagcgaatccatgaa
gaagaaacgcttgacgatctgaacgtgaacgacgtgttcgagcgctgtcttgctgtccat
gaggtgtctgaagagcagcggccggagctgcttcggacctaccaggaaacgatcttgtct
ctctatgaagacgatctgcaggcggattag
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