Waddlia chondrophila: wcw_0615
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Entry
wcw_0615 CDS
T01255
Symbol
dnaQ1
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
wch
Waddlia chondrophila
Pathway
wch03030
DNA replication
wch03430
Mismatch repair
wch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
wcw_0615 (dnaQ1)
03430 Mismatch repair
wcw_0615 (dnaQ1)
03440 Homologous recombination
wcw_0615 (dnaQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wch03032
]
wcw_0615 (dnaQ1)
03400 DNA repair and recombination proteins [BR:
wch03400
]
wcw_0615 (dnaQ1)
Enzymes [BR:
wch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
wcw_0615 (dnaQ1)
DNA replication proteins [BR:
wch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
wcw_0615 (dnaQ1)
DNA repair and recombination proteins [BR:
wch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
wcw_0615 (dnaQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ADI37983
UniProt:
D6YV22
LinkDB
All DBs
Position
complement(668481..669176)
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AA seq
231 aa
AA seq
DB search
MPARPIFYDTETTGIKAEHDRIVEIAAYDPISGCSLEELVNPGIPIPKEASKVHHITDDM
VKDAPTFKEVGQKFIEFCSGDVILIAHNNDNFDVHFLRHEFKRHALEMPEWRFFDTLKWA
RRYRPDLPRHALQFLREIYSIEANNAHRALDDVIVLHKVFEKMSDDLDIEQSYSLLCMPR
DITVMPFGKYQGKPLQEVPEDYVKWLAKSEAFEKPENLSLKESFIKLGILK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgccggctagacctatcttttatgatacggaaacaactggaatcaaggctgaacacgat
cgcattgtcgagatcgccgcttacgacccaatcagcggttgctctttagaagagcttgtc
aaccccggcattccaattcccaaagaagctagcaaggtacaccatatcacagacgatatg
gtcaaagatgctccgacattcaaggaggttggccaaaaattcatcgagttttgctctggc
gatgtgattctaatcgctcacaacaacgacaattttgacgttcattttctccgccatgaa
tttaagcggcatgcattagaaatgccggaatggcgttttttcgatacattaaaatgggcg
cgccgctatcgcccagatcttcctcgccacgcgctacagttcttgagggaaatctacagt
attgaagcaaacaacgcccacagagctcttgatgatgtgattgtccttcataaggttttt
gaaaagatgagcgatgatctagacatcgaacaatcctattctttgctatgcatgccaaga
gacatcacagtgatgccttttggcaaataccaaggcaagccgcttcaagaagtgccggaa
gattacgtcaaatggctggcgaagtcggaagcatttgagaaacctgaaaacttgtcattg
aaagaaagcttcatcaaacttggcatactgaaatga
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