Waddlia chondrophila: wcw_0687
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Entry
wcw_0687 CDS
T01255
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
wch
Waddlia chondrophila
Pathway
wch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wcw_0687 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wch03019
]
wcw_0687 (pnp)
03016 Transfer RNA biogenesis [BR:
wch03016
]
wcw_0687 (pnp)
Enzymes [BR:
wch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
wcw_0687 (pnp)
Messenger RNA biogenesis [BR:
wch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
wcw_0687 (pnp)
Transfer RNA biogenesis [BR:
wch03016
]
Prokaryotic type
tRNA degradation factors
wcw_0687 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_5
LLPH
Motif
Other DBs
NCBI-ProteinID:
ADI38054
UniProt:
D6YV93
LinkDB
All DBs
Position
complement(749656..751752)
Genome browser
AA seq
698 aa
AA seq
DB search
MEKKSMKVVVGEEEITFETGQIARQANGAVVVKSGETMLFCSACATAEPLENVDFLPLRV
DYQEKFASAGKTLGGFIKREGRPTERETLVCRLIDRPIRPLFEEGYYQDTQLLSYVWSYD
GVNSPDALAICAASAALTISDIPLKKAVGAVRVGMIDGQFILNPTVEHQEKSVLDLMIAG
TEDAVLMIEGYCKFLTEEQVIEAISIGHQGIQTICRALENWRQEVGKPKNLSKLKPLAKE
VIDAVEELVKDDLNQVLQIVDKKEREEAFDQIKKRVNETLCPEGEEAPKFEALEVAKAFK
KVSSGHMRRMIVKENKRSDGRATNQVRPIWIEQGLLPRTHGCSLFTRGETQTVAICTLGG
NNMAQRYEDLNGEGSRSFYLQYFFPPFSVGEVGRVGPPGRREVGHGKLAERALASILPSK
EEFPYTIRLESNITESNGSSSMASVCGGCLAMMDAGVPITRPVSGIAMGLILEENHYTIL
SDILGIEDALGDMDFKVTGDKNGITAFQMDIKVEGITIDIMRAALAQAKEGRIHILEKMF
EACPEPKKQMSKYAPRIEVLKVKPSKIGTIIGPGGKQIRAIIEETGAEIDIDDEGFVTIS
SSNLDGLQKAKRIIEDLTAEVEIGKVYEGKITSVVPFGIFVEILPGKEGLCHISEFDTQR
TNDLNEVVKVGDNVRVKVMDINERGQLVLSRKVLLVSK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaatcgatgaaagttgtcgtaggagaagaagaaatcaccttcgaaacagga
cagatcgcccgccaagccaatggcgctgttgttgtaaaatctggcgaaacgatgctgttt
tgcagcgcatgcgcaacagccgagcctcttgaaaacgtggactttcttcctttgcgagtc
gactaccaggaaaaatttgcttcagcagggaaaacgcttggcggatttatcaagcgggaa
ggaaggccgacggaacgggaaactctcgtttgccgtttaatcgacagaccgatccgccct
ctatttgaagagggatattatcaagatactcagctattgagctacgtatggtcttatgat
ggagtcaattccccggatgcgttggcaatctgtgcggcatcggcggcattgaccatctct
gatatcccgcttaaaaaagcggtcggagctgttcgcgttggcatgatcgacggacaattt
atcctcaatccgacagtggaacatcaagaaaaatccgtactcgatctgatgattgccgga
acagaagatgctgttttgatgattgaaggctactgcaaattcctaacggaagagcaggtg
atcgaagcgatttcgattggacatcagggaatccaaacgatctgccgcgctcttgagaac
tggagacaggaggtcggcaagccgaaaaacctcagcaaactcaagcctttagcaaaagag
gtgatcgacgccgttgaagaacttgtcaaagacgatttgaatcaagtgcttcaaatcgtt
gataagaaggaacgggaagaagcgtttgatcaaatcaaaaaaagggtgaatgaaacgctt
tgtccagaaggagaagaagctcctaaattcgaagctcttgaggtagcaaaggcgtttaaa
aaagtctcttcgggccatatgcgacgcatgattgtcaaagagaacaaaagaagcgatgga
cgtgcaacaaaccaagtgcgcccgatctggatcgagcaaggcttgctgcctcgtacgcat
gggtgctctttgtttaccagaggtgaaactcaaacagttgccatctgtactctaggcggc
aataacatggcgcagcgttatgaggatctcaacggcgaaggttcccgttctttttatctt
caatatttcttccctccattttctgttggcgaagtgggacgtgtcggccctcctggaaga
cgggaagttggtcatgggaaactcgctgagcgggcattagcaagcattcttccaagtaaa
gaggaattcccctacacgatccgccttgagtcaaacatcaccgaatccaacggttcctcc
tcaatggcttctgtttgcggcggctgcctggcgatgatggatgcaggagttccaatcact
cgtcctgtatcgggaatcgcaatgggtctgatccttgaagaaaaccattacacgatctta
tcggacattctcggcatcgaagacgctcttggagatatggactttaaggtgactggagac
aaaaatgggatcactgcttttcaaatggacatcaaagttgaagggatcacgatcgatatt
atgcgggcagctcttgctcaggcaaaagagggacgtatccatatacttgaaaaaatgttt
gaagcgtgccctgagccgaaaaaacagatgtcgaaatatgcaccaagaatcgaagtgctt
aaagttaaaccgagcaaaatcgggacaattatcgggcctggcggcaagcagatccgagcg
atcattgaggagactggagcagagatcgatattgatgatgaaggatttgtcaccatatcc
tcctctaatcttgacggcttgcaaaaagcaaaaagaatcatcgaagacctgactgctgaa
gttgagattggtaaagtctatgaaggaaaaatcacgtctgtggttcctttcggaattttt
gtcgaaatccttcccggaaaagagggactttgccacatttctgaattcgacactcaacgc
actaatgacttgaacgaggtggttaaagtcggcgacaatgtccgtgttaaagtgatggac
atcaacgagcgtggacaacttgtcctcagtagaaaagttcttcttgtaagcaagtag
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