Waddlia chondrophila: wcw_0856
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Entry
wcw_0856 CDS
T01255
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wch
Waddlia chondrophila
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wch03016
]
wcw_0856 (truB)
Enzymes [BR:
wch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
wcw_0856 (truB)
Transfer RNA biogenesis [BR:
wch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
wcw_0856 (truB)
Prokaryotic type
wcw_0856 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADI38222
UniProt:
D6YVR1
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All DBs
Position
complement(928000..928761)
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AA seq
253 aa
AA seq
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MKSKTQESLLKLQTTPSSEGILPINKPVGITAFTLVRKLRRLLGVKKIGHAGTLDPFATG
VMVMLIGRNYTKFSDHLMGQEKEYVGRVHLGIVTDTYDSDGVKLQTHSLIPSIEEISSAL
SHFQGVIEQIPPMYSAKKINGQKLYKLARQGEVIERKPVKLHVQTDLIAYEYPYLDIRVT
CSKGTYIRSIAHDLGQSLGCGAHLATLTRTRSGSLTLADCFDGKQLDAPDLDVNELCSKI
LNHDRYLSKNRRF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagactcaagaatccctcctaaagctgcagacgacaccctcttctgaagga
attctacccatcaataaacccgtaggcataacagctttcacccttgttcgaaagctgaga
agacttcttggtgtcaaaaaaattggacatgcgggaaccttagacccctttgcaaccgga
gtgatggtcatgttgatcgggagaaattatacaaaattttccgatcatttgatgggacag
gaaaaagaatatgtcggacgcgttcacttgggtatcgttaccgatacatatgactcagat
ggtgtcaaactacagacgcattctctcattccctctatagaagagatttcttccgccctt
tcgcacttccaaggagtgattgagcaaattcccccgatgtactcggcaaaaaaaatcaac
ggccaaaaactctataaacttgccaggcagggggaggtcattgaacgcaaacccgtaaaa
cttcacgtgcaaaccgacctcatcgcctacgaatatccatatcttgacatacgcgtgact
tgcagcaaagggacttatatccggtcaattgcccatgatcttgggcaatctcttggatgt
ggcgcacaccttgcgactctgacgagaacgcgtagcggatcactaactttagccgactgc
tttgacgggaaacaactggatgctcccgatttagatgtaaatgaactatgctcaaaaatt
ttgaatcatgatcggtatctatcaaaaaatagaagattttaa
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