Waddlia chondrophila: wcw_1274
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Entry
wcw_1274 CDS
T01255
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex, alpha subunit FadB
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
wch
Waddlia chondrophila
Pathway
wch00071
Fatty acid degradation
wch00280
Valine, leucine and isoleucine degradation
wch00310
Lysine degradation
wch00362
Benzoate degradation
wch00380
Tryptophan metabolism
wch00410
beta-Alanine metabolism
wch00640
Propanoate metabolism
wch00650
Butanoate metabolism
wch00907
Pinene, camphor and geraniol degradation
wch00930
Caprolactam degradation
wch01100
Metabolic pathways
wch01110
Biosynthesis of secondary metabolites
wch01120
Microbial metabolism in diverse environments
wch01200
Carbon metabolism
wch01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
wcw_1274 (fadB)
00650 Butanoate metabolism
wcw_1274 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
wcw_1274 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
wcw_1274 (fadB)
00310 Lysine degradation
wcw_1274 (fadB)
00380 Tryptophan metabolism
wcw_1274 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
wcw_1274 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
wcw_1274 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
wcw_1274 (fadB)
00930 Caprolactam degradation
wcw_1274 (fadB)
Enzymes [BR:
wch01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
wcw_1274 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
wcw_1274 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
wcw_1274 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADI38626
UniProt:
D6YWW5
LinkDB
All DBs
Position
complement(1351510..1353654)
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AA seq
714 aa
AA seq
DB search
MGKAFHLTIDPNGIARLAFDYPGEKVNKISLEVLEELDAVLEGIKDNQQIKALVITSAKE
KIFIAGADLKSFERLFKNFDLAEGMIKKGHSVYNKLEELPFPSIAVIDGVCLGGGLELAL
ACTYRVVGDSSKTTLGLPETNLGIFPGWGGTQRLPRLVGLMEGLKMVLTGRPVDAKKAFK
IHLADAIFPSEFMKEKTDAFVEEILTSKGKEKVLERRKSRGLMSLLFERNPIGRAFVFWQ
SRRSVLQKTKGQYPSPLAALDLIQNTYTMPLKKGLKKEVEAFVKSMSGAFQCAPNLIYIF
FNSEQMKKDPGMIGGQATGKEVKSVGVLGAGVMGSGIAWLMSYRDLPVRMKDVNWKAVGS
GFKSAWDTYKVLIKKRKLKPAQANRKFHLISGTIDYTGFDKLDFVIEAAVENLELKHKIL
KELEANVRPDAIIATNTSSLTIDELAPALKHPERLVGMHFFNPPARMPLVEIVSGEKTSP
EAVQTVFELCQRLKKTPVVVGDCSGFLVNRVFAHGFVEIMRMLEEGVPQERLDKLFLKFG
LPMAPFVLADEIGNDVNLKAMKSFESAYGIRMEVPKLLEKLNEKQLYGRKVGKGFYIYDK
KSKKINPEITSFLPHQNGMNISDTDAIDRVMLAMINEAARCLQENVIHNPGYLDMALVFG
VGFPPFRGGLLRYADSIGIEKLMDKYGHLVSTYGERFVPCEKLKEMQASRRGFF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagcatttcatttaacaattgatccgaatggaattgcgcggttggcttttgat
tatccgggtgaaaaagtgaataaaatctctctagaagttcttgaagagctggacgctgtt
ttggaagggataaaagataatcaacagatcaaggctttagtcattacaagcgctaaggag
aaaatctttattgccggagcggatttaaagagttttgaaaggctgtttaaaaattttgat
ctggcggaagggatgattaaaaaaggacatagtgtctacaacaagctggaagagctgcct
ttcccatcgatagctgtcattgatggcgtgtgccttggaggagggctggagcttgctcta
gcctgcacttacagggttgtcggagacagttcaaagacgactcttggcttgcctgaaacc
aatttggggatttttcccggatggggcggcacgcagaggctgccgcggcttgtcggcttg
atggaagggttgaagatggtgttgacaggccggcctgtcgatgcgaaaaaagctttcaaa
atccatcttgccgacgccatttttccttctgaatttatgaaggagaaaaccgacgcgttt
gtcgaggaaattctgacttctaaagggaaagagaaggttttagaaagaaggaagtcaaga
ggattaatgtctttgttgttcgaacgcaatcccattggcagagcctttgtcttttggcaa
agcaggcgaagtgttctgcaaaagacaaaagggcagtatccctcgcctttagctgcgctt
gaccttattcagaacacgtatacgatgccgcttaaaaaaggattgaaaaaagaggttgag
gcttttgttaaatcgatgtcgggagcttttcaatgtgcgcccaatttgatctatattttc
tttaactcggagcagatgaaaaaagatcctgggatgattggcggccaagcaacgggaaaa
gaggtaaagtcggtcggcgttttgggagcaggggtgatgggaagcggcattgcctggcta
atgagctatcgcgatcttcctgtccgaatgaaagatgtcaattggaaagctgttgggagc
gggtttaaatctgcttgggatacatacaaagttctcattaaaaaaagaaagcttaagccg
gcgcaagccaatcgcaaatttcacttaatttccgggactatcgattatacagggtttgac
aagctcgattttgtgattgaagcggcggtggaaaatttggagctcaaacataaaattctc
aaagaacttgaggctaatgtgcggcctgatgcgattatcgcgacgaatacatcttctttg
acaatcgatgaattagcaccggcgttgaaacatccggaaagattggtcggcatgcatttt
ttcaatccgccggcccgcatgccgttagttgagattgtgtccggagaaaaaacctcgccg
gaagctgtgcaaacagtctttgaattgtgtcagcgtttaaaaaagactcccgttgtcgtt
ggcgactgttccggcttccttgtcaaccgcgtttttgcccatggctttgtcgagatcatg
cggatgcttgaggagggggttcctcaagagaggctcgataagttattcttgaagttcggc
ttgccgatggcgccgtttgtccttgccgatgaaattggcaatgacgttaacttaaaagcg
atgaaaagttttgaaagcgcttacggcatacggatggaggttcccaaacttcttgaaaaa
ttgaatgaaaagcagttgtatgggagaaaagtgggcaaaggcttttacatctatgataag
aaatcgaaaaaaatcaatccggaaatcacctcttttcttccccatcagaatggaatgaac
atttcagacacagatgcaattgatcgcgtgatgcttgcgatgatcaacgaagctgccagg
tgtttgcaggaaaatgtcattcacaatccaggctaccttgatatggctttggtgtttggt
gtcggatttcccccttttcgaggcggacttctccgttatgcggactctattggtattgag
aagttgatggataaatacggtcatcttgtgtcgacttatggggagcggtttgtcccttgt
gaaaaattgaaggagatgcaggcatccaggcgtgggtttttctag
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