Waddlia chondrophila: wcw_1343
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Entry
wcw_1343 CDS
T01255
Symbol
groEL1
Name
(GenBank) Chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
wch
Waddlia chondrophila
Pathway
wch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wcw_1343 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wch03019
]
wcw_1343 (groEL1)
03110 Chaperones and folding catalysts [BR:
wch03110
]
wcw_1343 (groEL1)
03029 Mitochondrial biogenesis [BR:
wch03029
]
wcw_1343 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
wch04147
]
wcw_1343 (groEL1)
Enzymes [BR:
wch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
wcw_1343 (groEL1)
Messenger RNA biogenesis [BR:
wch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
wcw_1343 (groEL1)
Chaperones and folding catalysts [BR:
wch03110
]
Heat shock proteins
HSP60 / Chaperonin
wcw_1343 (groEL1)
Mitochondrial biogenesis [BR:
wch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
wcw_1343 (groEL1)
Exosome [BR:
wch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
wcw_1343 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
wcw_1343 (groEL1)
Exosomal proteins of breast cancer cells
wcw_1343 (groEL1)
Exosomal proteins of colorectal cancer cells
wcw_1343 (groEL1)
Exosomal proteins of bladder cancer cells
wcw_1343 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Relaxase_C
AEP1
DUF325
NNH2
Motif
Other DBs
NCBI-ProteinID:
ADI38695
UniProt:
D6YRK0
LinkDB
All DBs
Position
1436041..1437666
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKDIKYKEDARHKILKGVKTLAEAVKITLGPKGRNVVIDKSFGAPHITKDGVTVAKEI
ELEDKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYSEGLRNVTAGANPMDLKRGM
EEAVKVVVEELQRLSKKVETQQEIAQVATISANNDEEIGQIIAKAMERVGKDGTITVEEA
KGFETTLDVVEGMNFDRGYLSAYFMTNPETQECVLEDVYVLIFEKKITSIKDLIPVLQSV
AESGKSLLIIAEDVEGEALATLVVNRIRAGLKVCAVKAPGFGDRRKAMLEDIAILTGGQL
ISEETGMTLESTTVEHLGKAKKIVVTKEDTTLIEGQGDQSKIKDRVALIKRQIEETDSDY
DREKLQERLAKLAGGVGVIRVGAATEIEMKEKKDRVDDAQHATKAAVEEGILPGGGVAYV
RCIGAVNKKADALKGDQQTGARIISRALSAPLRQIAANAGQEGSIILQQVEKGKDSEGYN
ALTGEFVDMLTAGILDPTKVSRLALENAASVAGLLLTTEAIVAELPEDKSSAPAMHAGMD
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacatcaaatacaaagaagatgcaagacataagatcctaaaaggagtt
aaaacacttgctgaggctgtaaaaatcacgcttggtccgaaaggacgcaacgttgtgatc
gacaaatctttcggagcgccgcacatcactaaagatggtgtgacagttgcaaaagagatc
gagcttgaagacaagcatgaaaacatgggcgctcaaatggtcaaggaagtggctagcaag
accgctgacaaggctggagacggaacaacgacagcgacggtccttgccgaagcgatctac
agcgaaggtctaagaaacgtgactgcgggagcgaatcctatggatctgaagcgtggaatg
gaagaggcggtaaaggtcgttgtcgaagagctccagcgcttaagtaaaaaagtggaaacg
cagcaagaaattgctcaagtagccaccatttccgctaacaacgacgaagagatcggccag
atcatcgccaaagcaatggaacgcgttggcaaagacggcacgatcactgtggaagaagcg
aagggatttgaaacgactctggatgttgtcgagggaatgaattttgaccgaggctatctc
tcagcttatttcatgaccaatcctgaaacgcaggaatgcgtgcttgaggacgtttacgtt
cttatttttgaaaagaaaatcacttcaatcaaagatctgattcctgttctgcaaagcgta
gcggaaagtgggaaaagcctgttgatcatcgcagaagatgtcgaaggcgaagcgcttgcg
acacttgttgtcaaccgcatccgtgccggccttaaagtttgtgctgtcaaggctccagga
ttcggcgaccgcagaaaagcgatgttggaagatatcgccatcttgacaggcggccaactg
atctctgaagaaacaggaatgactttagaaagcacgactgtcgaacatcttggaaaagcg
aagaagattgttgtgacaaaagaggacacaaccttgatcgaaggccagggagaccagagc
aagatcaaagatcgagtcgcactgatcaagagacagatcgaagagacagattccgactac
gaccgcgaaaaattgcaagagcgtcttgctaagcttgccggtggagttggtgtgatccgc
gtaggggcggcgactgaaattgaaatgaaagagaagaaagaccgcgtcgatgatgctcag
cacgcaacaaaagcagcagtggaagagggcattcttcctggaggcggtgttgcatatgtt
cgctgcatcggtgcagtcaacaaaaaagctgatgctctaaagggcgatcagcagactggc
gcacgcatcatttctcgagcgttgagcgcacctcttcgccagattgccgccaatgccggg
caagaaggttcaatcatcttgcagcaggtggagaaagggaaagattctgaagggtataat
gctttgactggcgagtttgtcgacatgttgacagctggtatccttgatccaacaaaagtt
tcccgccttgcacttgagaatgcagcttcagttgctggcctgcttctgacaacagaagcg
attgtcgctgaacttccagaagacaagagcagtgcaccggctatgcacgcgggcatggac
tactaa
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