Waddlia chondrophila: wcw_1389
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Entry
wcw_1389 CDS
T01255
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
wch
Waddlia chondrophila
Pathway
wch00470
D-Amino acid metabolism
wch00550
Peptidoglycan biosynthesis
wch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
wcw_1389 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
wcw_1389 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
wch01011
]
wcw_1389 (murD)
Enzymes [BR:
wch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
wcw_1389 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
wch01011
]
Precursor biosynthesis
Amino acid ligase
wcw_1389 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DAO
TrkA_N
NAD_binding_8
AlaDh_PNT_C
Pyr_redox_2
FAD_binding_3
Mur_ligase
UDPG_MGDP_dh_N
FAD_binding_2
3HCDH_N
NAD_binding_2
Pyr_redox
GIDA
Motif
Other DBs
NCBI-ProteinID:
ADI38740
UniProt:
D6YRP5
LinkDB
All DBs
Position
complement(1480510..1481757)
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AA seq
415 aa
AA seq
DB search
MNVLVIGLGISGRSAAAFLMKRGHRVAAIDQRAETLRSDPLVVPLIDKGLTLLNTQCPGK
IEVFGQVVASPGISLTHPAIAEALKRNIEVIGEVELACRHLDQPMIAVTGTNGKTTVTQL
IGHVLNRCGKPAKVLGNGGIPLTAELDALQKEMIVCELSSYQLETLNSRVVDVGAVLNIT
PDHLDRYLNMEAYAKAKLRLANCLKSDKKLFLSQQVINDFGYLISDLKENVELIVDSNYK
SRLTHDEENCLAAKRICLEMGVLPEAFDCAESEFQKPPHRIEFVRKRRGVSYFNDSKGTN
LDAVKRAVERMDGPVILIAGGKGKGISFCPWIKPFSGKVKAIVAIGEARSLLLKQLGGEF
EVIEESSLKAAVAAASSIANDGDNVLLSPGCASFDMFSNFEERGDHFKECVQLLD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcttgtgatagggctgggaatcagcggccgttccgctgcggcatttttgatg
aagcgcggccatcgtgtagctgcaattgatcaaagagcggaaacgctgcgctcggatccg
cttgttgttcccttaatagataagggactgactttattaaacactcaatgtccgggaaaa
attgaggtttttggccaggttgtggcctctcccggcatttcccttacgcatccggcaatt
gcggaagcgttgaagcggaatatcgaagtgattggcgaagtggagcttgcttgccgtcat
ctggatcagccgatgattgccgtaaccgggacaaatggaaaaacaacggtgactcaactg
attgggcatgtcctcaacaggtgtgggaaaccggcgaaggttctcggaaatggcggaatc
cctttgacggcagaattggatgctcttcaaaaagagatgattgtttgcgaacttagctct
taccagctagagacattgaatagccgggtcgttgacgttggagctgttctcaatattaca
ccggatcatcttgacagatatcttaatatggaagcttatgctaaagcaaagctgcggttg
gctaattgtctgaaatcggataaaaaactctttctttcgcaacaagtgatcaatgatttt
ggctatttaatatcggatttaaaagaaaacgttgaattgattgttgatagcaattataaa
agcagattaactcatgacgaagaaaattgtctggcagctaaacggatctgcttggaaatg
ggggtgttgccagaagcgtttgattgcgcggaatcagagtttcaaaagcctcctcacaga
attgagtttgtgaggaaacggagaggcgttagctattttaacgatagtaaaggaaccaac
cttgacgctgtcaagcgcgctgtggaaaggatggacggtcctgtgattttaattgccgga
ggaaaaggaaaggggataagcttttgtccttggatcaaaccgtttagcgggaaggtgaaa
gcaattgtcgcgattggcgaggcaaggagtcttctgcttaagcaattgggcggtgaattt
gaggtgattgaagaaagtagcctgaaagcagcagttgcagcggcatcttccattgcgaat
gatggggataatgtgttactctctccgggttgtgcaagttttgatatgttcagtaatttt
gaagaacgcggcgatcattttaaagagtgcgttcagttacttgattag
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