Waddlia chondrophila: wcw_1396
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Entry
wcw_1396 CDS
T01255
Symbol
hspB
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
wch
Waddlia chondrophila
Pathway
wch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wcw_1396 (hspB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wch03019
]
wcw_1396 (hspB)
03110 Chaperones and folding catalysts [BR:
wch03110
]
wcw_1396 (hspB)
03029 Mitochondrial biogenesis [BR:
wch03029
]
wcw_1396 (hspB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
wch04147
]
wcw_1396 (hspB)
Enzymes [BR:
wch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
wcw_1396 (hspB)
Messenger RNA biogenesis [BR:
wch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
wcw_1396 (hspB)
Chaperones and folding catalysts [BR:
wch03110
]
Heat shock proteins
HSP60 / Chaperonin
wcw_1396 (hspB)
Mitochondrial biogenesis [BR:
wch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
wcw_1396 (hspB)
Exosome [BR:
wch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
wcw_1396 (hspB)
Exosomal proteins of other body fluids (saliva and urine)
wcw_1396 (hspB)
Exosomal proteins of breast cancer cells
wcw_1396 (hspB)
Exosomal proteins of colorectal cancer cells
wcw_1396 (hspB)
Exosomal proteins of bladder cancer cells
wcw_1396 (hspB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CaMKII_AD
SRP54_N
Motif
Other DBs
NCBI-ProteinID:
ADI38746
UniProt:
D6YRQ1
LinkDB
All DBs
Position
1487667..1489262
Genome browser
AA seq
531 aa
AA seq
DB search
MTSPKEIIFEEEARNKLLDGIVQLADIVAFTLGPKGRNVGLEKSWGAPTITNDGSSIVKD
IHLKDPCSNMGVAMAQEVVQKIKEKCGDGTTTGTLLLKALVEEGIKQIAAGHSPIGVKRG
IDKAVEAIVAAVEKSAIPIKTAQEIKNIATVSASGNETIGSMISEAMEKVGKNGVITIEE
GKGTETVIDLVEGMEFDRGYLSAYFCTDLEKMQTTMNNAQILLVDKKIANIHEILPILQA
VAASSRELLIIAEDLEGDALSTLVVNRLRGALKVAAVKAPGFGDRRKAMMQDIAILTGGT
LITEETGMSLKDAGPEVLGSAEQITITKDRTTIVKGGGSSEAIKARISQLENEISEASSS
YDKEKLEERKAKLSGGVAVIRVGAATEPEMKQKKQIFEDSLSSTKAAIEEGIVPGGGVAL
LRAKKSLESLKLENDEAVGSQIVAKACGTPLKQIAANTGFDGSVILMEVENADTNCGFNV
LTEKVEDLVKAGVVDPAKVVINSLIHAASVAGIVLISEALITDAEEDEETE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaccaaaagaaattatctttgaagaagaagcacgcaacaagcttcttgacggg
atcgttcagctagctgacatcgtcgcttttacacttggccccaaaggacggaatgtcgga
ttggaaaaaagctggggagcgccaacgatcacaaatgacggtagcagtattgtcaaagat
atccatttaaaagacccctgctctaacatgggcgttgccatggctcaggaagttgtgcaa
aaaatcaaagagaaatgcggcgacggcacaacaacaggcacgcttcttctcaaagctctt
gttgaagaagggatcaagcagatcgctgcaggacacagtcctatcggtgtcaagcggggc
attgataaagctgttgaagctattgtcgcagctgttgaaaaatcggcaattccaatcaaa
acagcgcaagagatcaaaaacatcgcgacagtttctgcatcgggcaacgaaactattgga
tctatgatctcagaagcaatggagaaagttggcaagaacggcgtgatcaccattgaagag
gggaaaggaacagaaacagtcatcgatcttgtcgaaggaatggagtttgatcgtggatac
ttaagcgcttatttctgcaccgaccttgagaaaatgcaaacaacaatgaacaatgcccag
attttattggtcgacaaaaagattgcaaacatccatgaaatccttcccatcctacaggct
gtcgccgcttcttcgcgcgaactgctcatcattgctgaagacctggaaggcgatgcctta
tcaacattggtcgtgaaccggctaagaggcgctttaaaagtagccgctgtcaaagctcca
ggctttggcgacagaagaaaagcgatgatgcaggatatcgcaatcttgacaggcggaacg
ctcattacagaagaaaccggaatgtctttaaaagacgcaggtccagaagttctcggctct
gcagaacaaatcacgatcacaaaagatcgaacgacaattgttaaaggcggaggctcttct
gaagcgatcaaagcacgcatttcccagcttgaaaatgagatttctgaagcaagcagctcc
tatgacaaagaaaaactcgaagagcgcaaagctaaactcagcggcggtgtagcagtgatc
cgcgtcggagctgcaacagagccggaaatgaagcaaaagaagcaaattttcgaagacagc
ctgagttccaccaaagctgcaatcgaagaagggatcgtccccggaggaggcgttgcattg
ctccgagcgaaaaaatccttagaatccttaaagcttgaaaacgacgaggctgtaggatcg
caaatcgtagcaaaagcatgcgggactccgcttaagcaaatcgcagcaaataccggcttc
gacggctccgttatcctaatggaagtggaaaatgccgacacaaactgcggtttcaatgtt
ttgacagaaaaagtggaagacctggtaaaagccggtgtcgtggatcctgcaaaagttgtg
atcaacagcctgattcacgcagcatctgtagcaggaatcgttctaatctctgaagcgctg
atcaccgacgctgaagaagacgaagaaacagaataa
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