Waddlia chondrophila: wcw_1572
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Entry
wcw_1572 CDS
T01255
Symbol
atoC
Name
(GenBank) sigma-54 dependent response regulator atoC
KO
K07714
two-component system, NtrC family, response regulator AtoC
Organism
wch
Waddlia chondrophila
Pathway
wch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
wcw_1572 (atoC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
wch02022
]
wcw_1572 (atoC)
Two-component system [BR:
wch02022
]
NtrC family
AtoS-AtoC (cPHB biosynthesis)
wcw_1572 (atoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_30
AAA_16
nSTAND3
AAA_2
Mg_chelatase
HTH_Tnp_ISL3
AAA_3
HTH_23
AAA_22
HTH_28
Phage_CP76
AAA_7
AAA_18
HTH_50
APS_kinase
MerR
Motif
Other DBs
NCBI-ProteinID:
ADI38920
UniProt:
D6YS75
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All DBs
Position
1649349..1650734
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AA seq
461 aa
AA seq
DB search
MSIEKILVIDDEEIIRTFIAETLSREGFEVSTAENGKKGIGQFKDCSYDLVFTDMKMPDL
TGIEVLTKIKEVSPQTPVVVITAYGSIENAVEAMRYGAFNYLIKPFSPDTIEAVVEKAKE
HQSLITENQYLREEVYNKRADTKQGVIAENTEMQQILKDVARIAKSNASVFITGESGTGK
EVIAQAIHDQSLRHSRPFIKVNCAAVPEALIESEFFGHEKGAFTGANQKRIGRFELANGG
TLLLDEVTEIPLTVQAKLLRAIQEQIFERVGGSKPIKVDVRIIATSNRDIKQAIDNHVLR
EDLYYRLNVVPIHLPPLKHRSDDILPLAEYFLTRMSKENHKKVKKLTSAAKQKLLSYHWP
GNVRELANIIERAVVMENKNEISPEYIFLEPTGDLPAKHQADLEASEEKGLPVGLSLREL
EKQLIIETLLAHNNNKKKTAEILGISPRTLRNKLNEYKNGS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagaaaaaatattagtcatagacgatgaagaaatcatcagaaccttcattgct
gaaactctgtctcgcgagggatttgaggtctctactgcggaaaacggcaaaaaagggatc
ggccagttcaaggactgctcttacgatctggtgttcactgatatgaaaatgccagaccta
actggtattgaggttctgacaaaaatcaaagaagtctctcctcaaacccctgtagtcgtg
attacagcgtatggcagtattgaaaacgcagtggaagcgatgcgctatggagccttcaac
tacctgattaagcctttttctccggacaccattgaagctgtcgtggaaaaagcaaaagaa
caccaatctttgatcaccgaaaatcaatacttaagagaggaagtctataacaagagagcg
gacacgaaacagggtgtgatcgcagaaaataccgagatgcagcaaattttaaaagacgtg
gctcgaattgcaaaaagcaacgccagcgttttcattacaggagagtcaggcacaggaaaa
gaggtaatcgcacaagcgatccacgatcaatccttaagacatagccgtcccttcataaaa
gtcaactgcgctgcagtacctgaagccttgattgaatctgaatttttcggacacgaaaaa
ggggcctttacaggagctaaccagaaacgaatcggacgtttcgagcttgccaatggagga
accttgcttctagatgaagtgacagaaatcccattgacagtgcaagcaaagctattaaga
gcgatccaggagcaaattttcgaaagagttggaggatcgaaaccgatcaaggtagatgtc
agaataatcgcgacgtcaaatcgggatatcaaacaagccatagacaatcacgttttgagg
gaagacctttactaccgattgaacgtagttcccatccatctgccgcctttgaagcatcga
tccgatgacattctgccattagctgaatactttcttactcgcatgtcgaaagaaaaccat
aaaaaggtaaaaaagctgacttccgccgccaaacagaagctccttagctatcactggccg
ggaaatgtgagagaattagcaaacattatcgagcgggctgtcgtcatggaaaacaaaaat
gaaatctctcctgaatacattttcctggagcctacaggggatctgccagcaaaacatcaa
gcagacttggaggcatcggaagaaaaaggacttcctgtgggtctttctctgcgtgagctg
gaaaaacaactgatcattgaaacactgcttgcccacaacaataataagaagaaaaccgct
gaaattttaggaatcagcccacgtaccctgcgcaataagctgaacgaatataaaaatggg
agctga
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