Waddlia chondrophila: wcw_1587
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Entry
wcw_1587 CDS
T01255
Name
(GenBank) putative DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
wch
Waddlia chondrophila
Pathway
wch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
wcw_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wch03400
]
wcw_1587
DNA repair and recombination proteins [BR:
wch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
wcw_1587
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
wcw_1587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ADI38934
UniProt:
D6YS89
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All DBs
Position
1666721..1667407
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AA seq
228 aa
AA seq
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METIRAEGIILQSLPVKDWDLLITAFTKEFGVMKFYYKKGQSKKRSKGALTSPLTCAEFI
CRKGNFDLIPLNEISVIDLHIDLRKTLEFLEYSCSWLKLIQRSQLPGKPAPNLYLLLKAF
LHSLPQFPKPETLHACFLLKLLRHEGLIELNPFCSVCSGPAAFQAGEPFCASHCSTNAIP
FNANELDLMQTLTFCRSLKEIENERIDFSFLEKISQLYRRIAEDFSTC
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgatacgtgcagaagggattatccttcaatccctccctgtaaaagactgggat
ctattaattaccgcattcacaaaagagttcggtgtcatgaaattctactacaaaaagggt
caaagcaagaagagaagcaaaggagcgttgacctcgccattgacatgcgctgaatttatc
tgccgaaaaggaaattttgatctgatcccgcttaacgaaatttctgtgatcgatctccac
attgacttgagaaaaacgctggaatttctcgaatactcatgctcctggctgaaactgatc
cagcgttcacagcttcccgggaaaccagctccgaatctttacctgctattaaaagcattc
ttacactccctgccccaatttccaaaaccggaaacgctgcatgcttgctttctacttaaa
cttttaagacacgaagggctgatagagctcaaccctttttgctcagtttgcagtggacct
gccgctttccaagcgggagaaccgttttgcgcctcccactgttcaaccaacgccatcccc
tttaatgcaaatgaattggatttaatgcagacgctgacattttgccgctcgctcaaggaa
attgaaaatgaacggatcgacttttctttccttgaaaaaatctcgcaactttatagaagg
atcgccgaagatttttctacttgctag
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