Waddlia chondrophila: wcw_1611
Help
Entry
wcw_1611 CDS
T01255
Symbol
sctD
Name
(GenBank) putative type III secretion system protein SctD
Organism
wch
Waddlia chondrophila
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CdsD_PD2
Yop-YscD_cpl
CdsD_C
CdsD_PD1
FHA
Yop-YscD_ppl_1st
BON
Yop-YscD_ppl_3rd
Yop-YscD_ppl_2nd
T2SSB
Y4YQ_C
DUF2613
Motif
Other DBs
NCBI-ProteinID:
ADI38956
UniProt:
D6YSB1
LinkDB
All DBs
Position
1698607..1700397
Genome browser
AA seq
596 aa
AA seq
DB search
MGAKLVVKDGESKGLTLPLEGRKEWVIGSDPEACQLLLEDPMTAQKHLICRTTPEGIELE
NLSEDNPVSVNEQIVNHPLLLKNGDSVKIGQNFFTFYAGEENGEEEKPSIVDEDAPEQDT
IYEEESDEDKGILAEIDFDLRESGRWLLKVIGGPNNGAEFSMQTGSSYMIGTDPTSCDVV
FHDTSVSRQHAKITVSKNDALSIEDLKSRNGTLVDGNPLEGQQTFEPNTLVTLGTTSFVV
YDREGEMQTIISPLLPSIVKVLQEEEETEEKTQAKESERKKLEEELATTKESKAQNALGA
FILIGIIAGLFAVVGIGTVSLFQSSPVQIREKIDYSAALAQAMQKFPQVRYSYNENSGRL
LLIGHVMTQSDKNQLMYNLQGLEFLKGVDDSGLIIDEYVWRETNQILARGNRFRGISVHS
PQAGKFVLSGYLKTRKQAEELSDYITANFPYLDILERRVIVEEDVLTTVETDLNNAGLRN
FNVQINNGELTISGGASQEQLAKVDRLVRKFREIPGVRNVKTYINEIAPEQTMVNISDKY
TVSGFSNQGGVNLNVVINGRILTRGDVLDGMTITSIRPDAIFLEKGGVKYRIDYNN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaaacttgtcgtaaaagatggtgaatcaaaagggttgactctccctttggaa
ggaagaaaggaatgggtgatcggaagcgatccggaagcttgccaattactattggaagac
ccaatgactgcacaaaaacatctgatatgccggactacccccgaaggaattgaacttgaa
aatctcagtgaagacaaccccgtttctgtgaacgaacaaatcgttaaccatccccttctg
cttaaaaatggggattctgtcaaaattggccagaatttctttacattctatgccggagaa
gaaaacggcgaagaggaaaagccatcaatcgtcgatgaagatgcgcctgagcaagacact
atctatgaagaagaatccgatgaggacaaagggatcttggctgaaatcgatttcgacctg
agagagtcgggaagatggcttctaaaagtgattggcggtccaaacaatggcgctgaattt
tctatgcaaacaggatccagctacatgattggaacagacccaacctcttgcgatgtcgtt
tttcacgatacaagcgtctctcgccaacatgcaaaaattacagtcagcaagaacgacgca
ttaagcattgaagatctcaaaagtcgaaacggaaccctagtcgatggcaatcctttagaa
ggccagcaaacattcgaacccaacacgcttgtgacattgggaacaacctcttttgtcgtc
tatgatagggagggagaaatgcagaccatcatttctccccttctaccgtctattgtgaaa
gtgctgcaagaagaagaggaaacagaagagaaaactcaagcgaaagaaagcgaaagaaaa
aaactcgaagaagagcttgccacgaccaaggagtcgaaagcgcaaaacgctctaggagct
tttatcttaatcggcatcattgccggactgttcgcagttgtcggtattggaacagtcagc
ctgtttcaatcatctcctgtacagattagggaaaaaatcgactattcagcagctcttgca
caagcaatgcaaaaatttccgcaagtgagatattcctacaatgaaaacagtggaaggctt
cttttaatcggacatgtcatgacgcagtcggataaaaaccagctgatgtacaacttgcaa
gggctggaatttctgaaaggagttgatgatagcggcttaattatcgatgaatacgtttgg
agggaaaccaatcagattcttgcccgaggcaatcgcttccgcgggatcagcgtccactct
cctcaagcgggaaaatttgttctatcaggctacctgaaaacacgtaaacaagcagaagag
ctctccgattacattacagcgaacttcccctatctcgatatccttgaaaggcgggtaatc
gtcgaagaagacgttttgacaacagttgaaaccgacttaaataacgccggcttgagaaat
tttaatgtgcaaatcaataatggcgaattgaccatttcaggcggggcttcgcaagaacaa
cttgccaaagttgatcgtctggtgcgtaaattcagggaaattccgggtgtgcgcaacgtc
aagacatatatcaacgagattgctcctgaacagacaatggtcaatatcagcgacaaatac
acagtttcaggcttttccaatcagggaggagtgaatctcaatgttgtgatcaatggacgc
atcttaacaagaggagatgtattggacggcatgacaattaccagtattcgccctgacgcg
atttttttagaaaaaggcggagtgaaatacaggatcgactataataattga
DBGET
integrated database retrieval system
