Weissella ceti WS105: WS105_0067
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Entry
WS105_0067 CDS
T03295
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wci
Weissella ceti WS105
Pathway
wci03420
Nucleotide excision repair
wci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WS105_0067
03430 Mismatch repair
WS105_0067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wci03400
]
WS105_0067
Enzymes [BR:
wci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WS105_0067
DNA repair and recombination proteins [BR:
wci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WS105_0067
MMR (mismatch excision repair)
Other MMR factors
WS105_0067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
AAA_19
UvrD_C_2
UvrD-helicase
AAA_30
Viral_helicase1
DEAD
NACHT
AAA_16
DUF3828
Motif
Other DBs
NCBI-ProteinID:
AIM63657
UniProt:
A0A075TXI0
LinkDB
All DBs
Position
85729..88023
Genome browser
AA seq
764 aa
AA seq
DB search
MEEQEWQLERQRLVVVNEELATQLVDSELEYEKAHAETSAVERNYGANTSINTLEEDDSM
ETNAEIQQQRNIVARVTETENIMQKKLQTLKTLTGSPYFGRVNLVEDGYKEKLYIGLASL
QGEDGDFLINDWRAPISGVYYNGVLGKVTYPTPVGEQEAFLEKKRQFTIEDGEIVNMFDT
DVTIGDEMLQYTLGQQNDDTMHNIVATIQQEQNRIIRDTESDLLVVQGVAGSGKTSAILQ
RIAFLLFHAREELNSDQIVLFSPNRLFSSYIADVLPSLGERNMRQVTLHEFLSARLQGLQ
VQTLFERYEHADEVVQTARQAMTTAIEAPELYDCLVNYLSQVRPQEVRFADVYFDDEIWF
SADEFKEVFASFPAAYSFVERMKMTQEVFLERLTEQYTELIHDEWVELGLDALSNQEYQA
LRLNQDGDLMDDEDTHAIHEEVAQRYVAERLRSVDDAVYNFAFVDVYAQYADFLVALGDM
QYATLNADWWALKAERYSQQLELHKIDYEDAIPVLYLRDLMTGAGTNQYMQYIFVDEMQD
YTQLQMLYLKHAFPRAKFTLLGDAEQALFRAVETPSELLGKYKTIFGDQRVSFVQLNKSY
RSTTEIMDFAKALLPDGDEIVSFERHGAKPELSVLSMDDISEELATLIGDIQTRQQTVAV
VTKTQQDAHIVGEALRRFEIQHQVIENEDRTRDEHVLVLPIYLAKGLEFDAVVGYDVSAE
NYPDDESVGLLYTLASRAMHELHLISKGPATPLLETVMSYITLK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaagaatggcagttggaacgtcagcgtttagtagttgtgaatgaagaattg
gccacacaattggttgatagtgagttggaatatgagaaagctcatgcagaaactagtgcc
gttgaacgaaattatggtgcgaatacgtctattaatactcttgaagaagacgattccatg
gaaaccaacgctgaaattcagcaacaacgtaatattgtggcacgtgttactgaaaccgaa
aacattatgcagaaaaagctgcaaacattgaaaactttgacgggaagtccttattttggt
cgcgttaacttagtggaagatggttataaagaaaaattatatattggtttagcgtctttg
cagggagaagacggtgactttttgattaatgattggcgcgcgccgattagtggagtctat
tataacggggtcttggggaaagttacatatccaacacccgtaggggaacaagaagcgttt
ttggaaaagaagcgtcaattcaccatcgaagacggtgaaattgtgaatatgtttgatacg
gatgtgaccattggtgacgaaatgctgcaatatacattggggcaacaaaacgatgacaca
atgcataatattgtggcgacgattcaacaagaacaaaatcgtattattcgagatacggaa
agtgatttgttagttgttcaaggagttgctgggtcggggaagacgtcagcgattttgcaa
cgaattgcatttttacttttccatgcacgtgaagaattaaactctgatcaaattgttctc
ttttcaccgaatcgattgttttcaagttatattgcggatgttttaccctcattgggtgaa
cgaaatatgcgtcaggtaacgctacatgaatttttgagcgctcgtctacaagggttgcaa
gtacagactctgtttgaacgttatgaacatgctgatgaagtcgtacaaacagctcgacaa
gcgatgacaacagccatagaagcccctgaattgtatgactgtttggtgaattatttatct
caggtacgcccgcaagaagttcgttttgcggatgtttattttgatgatgaaatttggttt
agcgccgatgaatttaaagaggtgtttgcttcgttcccggcagcgtattctttcgtggaa
cgcatgaaaatgacgcaagaggtctttttggagcgcctgacggaacaatatactgagtta
atccatgatgaatgggttgagttgggattggatgcattgagtaatcaagagtatcaagcc
ctacgattgaatcaagatggtgatttaatggatgatgaggatactcatgccattcatgaa
gaggttgcacaacgatatgttgctgagcgcttacgtagtgtagatgatgcagtttataat
tttgcttttgttgatgtatacgcgcaatacgctgattttcttgtggcgcttggcgacatg
caatatgcaactctgaatgcggattggtgggcattgaaggcggaacgctatagccaacaa
ttagagctgcataaaattgattatgaagatgcgattccggttttgtatctacgtgattta
atgactggtgctggaactaaccaatatatgcagtatatctttgtggacgagatgcaagat
tatacacaattgcagatgttgtatttgaaacacgccttcccgcgtgcgaaatttacattg
ttaggtgatgcagaacaagcgttattccgtgcggtagaaacacctagtgagctcctagga
aagtataaaacaatctttggtgatcaacgcgtaagtttcgtgcaattaaataagtcgtat
cgttcaacgactgagattatggattttgccaaagcgttgttacctgatggggatgagatt
gttagttttgaacgtcatggtgccaaacctgaattaagtgtgttatctatggatgatatt
tctgaagaattggccactttgattggcgatattcaaacgaggcagcaaactgttgcggtt
gtgactaagacacaacaggatgcgcatattgtaggtgaagcgttacgtcgttttgagatt
caacatcaagttattgaaaatgaagatcgaacacgtgatgaacatgtcttggttttgccg
atttatttggctaaaggattagagtttgatgcagttgttggatacgatgtttcagctgaa
aattatccagatgatgaatcagttggtttgttgtatactttggcctctcgagcaatgcat
gaattgcatttgatttctaaaggacctgcaacaccattgcttgaaacggttatgtcgtat
ataactttaaagtga
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