Weissella ceti WS105: WS105_0399
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Entry
WS105_0399 CDS
T03295
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
wci
Weissella ceti WS105
Brite
KEGG Orthology (KO) [BR:
wci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wci03019
]
WS105_0399
03009 Ribosome biogenesis [BR:
wci03009
]
WS105_0399
Enzymes [BR:
wci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WS105_0399
Messenger RNA biogenesis [BR:
wci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS105_0399
Ribosome biogenesis [BR:
wci03009
]
Prokaryotic type
rRNA helicases
WS105_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Wzy_C_2
Mito_fiss_Elm1
Motif
Other DBs
NCBI-ProteinID:
AIM63989
UniProt:
A0A075TYP4
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All DBs
Position
466458..467810
Genome browser
AA seq
450 aa
AA seq
DB search
MAKFTDYNLRPEIYRGLEAIRFTTPTPVQERFIPVVLQGRSVVGQSQTGSGKTHAFLIPI
FEKLDVNAKQVQAIITTPSRELAQQIYDASQKMADAFPEDARPKVGVYVGGTDKARQIQQ
LQNNQPQIVIGTPGRIKDLYKSGALDIHTAKTLVIDEADMTMDLGFMPEVDAIAGALPEN
LQMLVFSATIPQKLQPFLKKYLSNPVVDEIPTTTVIAPTIENILLETKGKEKDQVVYDLL
TMGDPYMALVFTNTKERAKELSRNLKERGLKVAEIHGGIQPRERRRTMNQIQHLDYQYVV
ATDLAARGIDIPGVSLIINDGIPNDLEFFVHRVGRTGRNGMDGRAITLYSPDEEDKVAAV
EQLGVTFEPMALKKGELTPGFDRRRRKQRSKSSEKLDPTMIGMVKKKKKTVKPGYKRRIK
NEIARDAKYKKRIEQRQTDRATRKARKQQG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatttacagattataatctacgtcccgaaatttaccgtggactagaagcaatt
cgcttcacaacgccaacgccagttcaagaacgttttatcccagttgtcctacaaggacgc
tcagtggtaggacaatcacaaactggttctggaaagacacacgcatttttgattccaatt
tttgagaagctagatgttaatgctaagcaagtacaagcaattatcacaacaccttcacgt
gaattggcacaacaaatttacgatgctagccaaaagatggccgatgcattccctgaagac
gcacgtccaaaggttggtgtttacgttggtggaactgacaaggcacgtcaaattcaacaa
ttgcaaaacaaccaaccacaaatcgtgattggaacaccaggtcgtatcaaggacttgtac
aagagtggtgctttggatatccatactgcaaagacattggttatcgacgaagccgacatg
acaatggacttaggatttatgcctgaagttgatgccattgcgggtgcattgcctgaaaac
ctacaaatgttggttttctcagcaacaattccacaaaagctacaaccattcttgaagaag
tacctaagcaacccagttgtggatgaaattccaacaacaactgttattgcaccaacaatt
gaaaacattttgttggaaacaaagggtaaagaaaaggatcaagttgtttatgatcttttg
acaatgggagacccatacatggccttggtatttacaaatactaaggaacgtgcgaaggaa
ctttctcgtaacttgaaagaacgtggattgaaggttgcggaaatccacggtggtatccaa
ccacgtgaacgtcgtcgtacaatgaatcaaatccaacacttggactatcaatatgttgtt
gcgactgacttggccgcacgtggaattgatatcccaggagtttcattgatcattaacgat
ggtattccgaatgacctagaattcttcgttcaccgtgttggtcgtactggacgtaacggt
atggatggtcgtgcaattacattgtactcaccagatgaagaagataaggttgcagcggtt
gaacaattaggtgttactttcgaaccaatggcattgaagaagggtgaactaacacctgga
tttgaccgtcgtcgtcgtaagcaacgttcaaagtcttcagaaaagctagatccaacaatg
attggaatggttaagaagaagaagaagactgttaagcctggttacaagcgtcgtattaag
aacgaaattgctcgtgatgcgaagtacaagaagcgtattgaacaacgtcaaacagaccgt
gcaacacgtaaggctcgtaagcaacaagggtaa
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