Weissella ceti WS105: WS105_0807
Help
Entry
WS105_0807 CDS
T03295
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wci
Weissella ceti WS105
Pathway
wci03030
DNA replication
wci03430
Mismatch repair
wci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WS105_0807
03430 Mismatch repair
WS105_0807
03440 Homologous recombination
WS105_0807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wci03032
]
WS105_0807
03400 DNA repair and recombination proteins [BR:
wci03400
]
WS105_0807
Enzymes [BR:
wci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WS105_0807
DNA replication proteins [BR:
wci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WS105_0807
DNA repair and recombination proteins [BR:
wci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WS105_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIM64397
UniProt:
A0A075U6B9
LinkDB
All DBs
Position
complement(856191..859505)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTPLQTKSAFSLLESPMMPKTLVENAKQKGYTSVALTDTNVLYGMDAFYNAALAADIKPI
LGLTAQMQGLTMTQPFPFVLLVENQTGYRNLLHISSVIMSQTEPVTLESLRDHLAGLFVI
VPRISELSLLLGMQSNIDVAGKWLADVQAIVPAGHLYLGVSSDMTDDATTTYRTLSGACD
VPLVALDSVEYADPSDQFAAQVVTKIGQGEVLANIAASQKDTPNRYLASAVDSTERFVAK
GLADAVGVADWIAENSHFEIEATQDNLPAVPLPEGQNATSYLAELAQAGLNERVSVLPDT
DRVPYEERLARELQIIDELGFNQYFLIVADMIAFAKREDIRIGPGRGSAAGSLVAYVLGI
TDVDPIAYDLLFERFLNPERVQMPDIDIDIPDNRREDVLRYLHQRYGHEHVAQIITFSTM
AMRAVVRDVARVFGLNPSQIDQLAKTLPREVGMTVADAYEQSQPFKNALIDLPVDGELLV
ETAKKLEGLPRNASLHAAGVVLSADAIEHIMPVQLGEDERLVTQLPKGPVERLGLLKMDF
LALSNLNILDTALRAVAKVAPDFDINQIDLNDAQTLALFQKGQTNGVFQFESAGMKNMLK
DLKPDSFEDIVAANALFRPGPSQNIGHFIARKHGQEAQDVPDASMAAILAPTYGIIVYQE
QVMRVAEQFAGFSLGQADLLRRAMSKKDKQQLDAIKAQFVSGAEGMGHPRELAEQVYGYI
ETFAMYGFNRSHAVAYSKLAMQLAYLKAHYPAAFYKAVMNDAIAQRPKISAYLAEARSLG
VEIVRPDINTSWQGYTVTDQGQLQMGLASISGLRRDFREVLITERQENGRYKSLDELVAR
LPTKYQKVETLEPLVYTGALDGFDTNRKKLVQSLKPIIDAVAFSAGSLDLLADVKPKEIV
VEPYTDAEQLDLEFEYLGVYLSGHPLEAYLTLPHQDIANLSLNAPKATILGYVKGIKVIR
TKKGDEMAFVDVMDLSGDLSVTVFPTLYKQIGSALENGRILQINGTVEAQRKGDGLQMIA
NQLQVAKLPEVGKGTWYLRLVAPEQIEQLNQLLPQHKGLNPVVVVNMMSGRKVRLDQRQW
LADDDTTKKELIALLGAENAIFKV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacaccattacaaacaaagtcagccttcagtttgttagaaagcccaatgatgcctaaa
acgttggttgagaatgccaagcaaaaagggtacacatcagtcgcactaacagacacaaat
gtcctgtatggaatggatgccttttataatgctgctttggctgcggacattaaaccaatt
ttgggtctaaccgctcaaatgcaaggcttaacgatgacacaaccatttccttttgtgtta
ttagttgaaaatcaaacaggttatcgtaaccttttgcatatcagtagtgtgattatgagc
caaacagagcctgtcactttagaaagcctgcgtgatcatttagcaggtctttttgtgatt
gtgccgcgtatcagtgaactgtcattgttattggggatgcaaagtaatattgatgtcgca
ggtaaatggttggcggatgtgcaagccatcgtacctgctgggcatctttatttaggtgtg
tcatcagatatgacggatgatgcgactacaacataccgaacactatcaggtgcctgtgat
gtaccgttggttgcgttagatagcgtggaatatgctgatccaagtgatcaatttgccgca
caagtcgtcacgaagattggccaaggagaagtattggctaacattgcggcgagtcaaaaa
gacacgccaaatcgctatttggcaagcgcagtggatagtaccgaacgttttgtggcaaaa
ggtttagcggatgccgttggagtagcggattggattgcggaaaatagtcactttgaaatc
gaagcaacacaagacaatctaccagctgtgccattaccagagggacaaaatgcaacaagc
tatttagcagagttagcgcaagctggtttaaatgaacgcgtatccgtactacccgatact
gatcgtgtaccgtacgaagaacgcttagcccgtgaattacaaatcattgatgaattagga
ttcaatcaatatttcttgattgtggccgatatgattgcctttgcgaagcgcgaagatatt
cgaattggacctgggcgtggttctgcggccggatcattggtggcctatgtgctaggcatt
accgatgttgatccaattgcttatgatcttttgttcgaacgtttcttgaatccagaacgt
gtgcaaatgcccgatattgatattgatattcccgataatcgtcgcgaagacgttttgcgt
tatctacatcaacgttatggacatgagcacgtcgcgcaaatcattactttttcaacaatg
gcgatgcgtgcggttgttcgggatgtcgcacgtgtatttggcttgaatccgtcccaaatt
gatcaattagcgaagactttaccacgtgaagtggggatgacagtcgcggatgcatatgaa
caatcacaaccatttaagaatgccttgattgacttgcctgtggatggtgaattgttagtg
gaaacagccaagaagcttgaaggattaccacgtaatgcttctttgcatgcggctggggtg
gttctgtctgctgatgcgattgaacacattatgccagtccaattaggggaagatgagcgt
ctcgttacccaattacctaaaggcccagttgaacgactaggtttattaaagatggacttt
ttggctttatctaacttgaatattttggatactgctttacgtgcagttgcgaaagttgcg
cctgattttgatatcaaccaaattgatttaaatgatgcccaaacattggctttgttccaa
aaagggcaaaccaatggggttttccaatttgaatcagctgggatgaagaatatgttgaag
gacttaaagccggattcatttgaagacatcgtggccgcgaatgcactattccgtccagga
cctagtcaaaacattggacatttcattgcccgtaaacatggtcaagaagcgcaagatgtg
cctgatgcaagtatggccgcaattttagcaccgacttacggtattattgtctatcaagaa
caagtcatgcgtgtggcggaacaatttgctggtttctcattgggacaagccgacttacta
cgtcgtgcgatgtctaagaaagacaagcaacaactagatgcgattaaagcacaatttgtg
agtggcgctgaagggatgggacatccccgtgaacttgcggaacaagtctacggatatatc
gaaaccttcgccatgtatggtttcaatcgctcacacgccgtggcgtattcaaagctagcc
atgcaattggcttatttaaaggcgcattatccagccgctttctacaaagccgtgatgaat
gatgcgattgcgcaacgtccaaagattagtgcctacctagcggaagcacgcagtcttggt
gttgaaattgtgcgacctgatattaacacgagttggcaaggctacacggttaccgatcaa
gggcaactgcagatggggttagcgtcaattagtggtctgcgtcgtgatttccgtgaagtc
ttaatcactgaacgccaagaaaacgggcgttacaaatcattagatgaattggttgcccgc
ttaccaaccaaataccaaaaggttgaaacgttggaaccattagtgtacaccggtgcatta
gatgggttcgatacgaaccgtaagaaactggtccaatcattaaagccaattattgatgcc
gttgcgttttcagcgggttcattagatttgttagcggatgtgaagccaaaggaaattgtg
gtggaaccatataccgatgcggaacaattagatcttgaatttgaatatctaggggtgtac
ttaagtggacatccgttagaagcatatttgacattaccacaccaagatatcgctaactta
agtttaaatgcaccgaaagcaacgattttagggtatgtaaagggaatcaaagtcatccgc
acgaagaagggtgatgaaatggccttcgtggatgtcatggacttaagtggtgacctatct
gttacagtattcccaacgctttataagcaaattggtagtgcgttggaaaatgggcgtatc
ttacaaattaatgggacggttgaagcccaacgtaagggtgatggcttgcaaatgattgcg
aaccaacttcaagtagcgaagttacctgaagttggtaaagggacttggtacttacgttta
gttgcaccagaacagattgaacagttaaatcaactattaccacaacataaaggcttaaat
ccggttgtggtcgtgaacatgatgtctgggcgtaaagttcgtttggatcaacgccaatgg
ttagcggacgatgacacaactaaaaaagagttgattgccctactaggcgctgaaaatgcc
atttttaaggtgtaa
DBGET
integrated database retrieval system
