Weissella ceti WS105: WS105_1175
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Entry
WS105_1175 CDS
T03295
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
wci
Weissella ceti WS105
Pathway
wci03030
DNA replication
wci03430
Mismatch repair
wci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WS105_1175
03430 Mismatch repair
WS105_1175
03440 Homologous recombination
WS105_1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wci03032
]
WS105_1175
03400 DNA repair and recombination proteins [BR:
wci03400
]
WS105_1175
Enzymes [BR:
wci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WS105_1175
DNA replication proteins [BR:
wci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WS105_1175
DNA repair and recombination proteins [BR:
wci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WS105_1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
TIP49
AAA_14
AAA_24
AAA_19
AAA_assoc_2
HAT_Syf1_M
AAA_16
Glyco_tranf_2_5
B12-binding_2
DUF815
Amelogenin
Bflower
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AIM64765
LinkDB
All DBs
Position
complement(1222859..1224622)
Genome browser
AA seq
587 aa
AA seq
DB search
MKGDDGAMAYQALYRTWRPQKFSDLIGQEVVTKTLKNTIESGQITHAYLFNGPRGTGKTS
AAKIFAKAVNCLHPDHGEPDGTCEICLAADAGTLGDVVELDAASNNGVDEIREIREDVNY
APTQAKYKVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPQKIPATIISRTQRF
DFKRIDAKASYDRMVHILNARGNAYDESALRVIANAADGGMRDALSILDQVLSFGDGSIT
LDNALLVTGSVTQTLLGEYLQAVVAHDTQAALGKLSDVLAAGKDAQRFIEDLISYARDLL
LYTEAPDLITLVPDENFQEMAKSEKPQVWYNMIDVLNDTQQQLRYTNRPSIYLEVLTVKL
SQPKQVVQTVDVAAEPVQNVVAQPAQPAQPAQPAQPAQPAQPAQPAQPAQPVAKAAVSDD
KQSVFKVLQSATRGDLNRVISIWGDVTNMLPVSQQAMLNVAKPIAASPNGLVVAFDFDVI
RMNAMKNAELVNTVTQQLRILTESDTERQLIFITADNWPTLRAEFLAQRQAAPAASAPQA
ADQNEQVQLNEVVDAGMPEEPTENQAHPAVDEAINLFGSEMVETQED
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggggacgatggtgcaatggcgtatcaagcattatatcggacatggcgaccacaa
aagttcagtgatttaattggacaagaagtcgtcacgaagacattaaaaaacaccattgag
agtggacaaattacccacgcatatctctttaatggaccgcgtggaactgggaaaacatca
gcagccaaaatttttgctaaagcagttaattgtttgcatccggatcatggtgaaccggat
ggtacatgtgaaatttgtttagcagctgatgctggtacattaggtgatgtagttgaattg
gatgcggcctcaaacaacggggttgatgaaattcgtgaaattcgtgaggatgtgaattac
gcacctacacaagcaaagtataaggtttacattattgatgaggttcacatgttatcaaca
ggggcctttaatgccttattgaaaacattggaagaaccaccagcaaatgtaatctttatt
ttggcaacgacggaaccacaaaagattcctgccacaatcatttctcgtacgcaacgtttt
gactttaagcgtattgatgcaaaggcatcttacgaccgtatggttcatattctaaatgcg
cgtggtaatgcgtatgatgaaagtgccctacgtgtcattgcgaatgcagctgatggtgga
atgcgtgacgcattgagtattctagatcaagtcttatcattcggggatggttcaattaca
ttggacaatgctttgttggttactggatcagttacgcaaacattgttaggtgaataccta
caagcagttgtcgcacatgatacacaagcagcgttaggtaagctaagtgatgttctggct
gcggggaaagatgcacaacgctttattgaagatttgattagttatgcacgtgacctcttg
ttgtatacagaagcgccagatttgattacgctggttccagatgaaaacttccaggaaatg
gccaagtcagaaaagccgcaagtttggtacaacatgattgatgtgttgaacgatacgcaa
caacaattgcgttatacaaatcgtccaagtatctacttagaagtgttgactgttaaattg
agccaaccaaaacaggttgttcaaacagttgacgttgcagcagaacccgttcagaatgtg
gtggcacaaccggcacaaccggcacaaccggcacaaccggcacaaccggcacaaccggca
caaccggcacaaccggcacaaccggcacaaccggtggcgaaagcagcagtatctgatgat
aagcaatcagtgtttaaggtgcttcaatctgcaactcgtggtgatttaaatcgtgtcatt
tctatttggggtgacgtgacaaacatgttgccagtgtcacaacaagcgatgctgaatgtt
gctaaaccaattgctgcatcaccaaatggattggtagttgcgtttgattttgacgtcatt
cgaatgaatgcgatgaagaatgcagaactagtgaatacggtgacgcaacaattacgtatt
ttgacggagtcagatacagaacgtcaattaatcttcattacagctgataattggccaacg
ttacgtgcggaattcctagcacaacgtcaagctgccccggctgcatcagcaccacaagca
gctgaccaaaatgaacaagtgcaattgaatgaagtagtagatgcggggatgcccgaagaa
cctactgaaaatcaggcgcatccagctgttgatgaagcaatcaacttgtttggatcagag
atggttgaaacacaagaagactaa
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