Wolbachia endosymbiont of Cimex lectularius: WCLE_00220
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Entry
WCLE_00220 CDS
T03628
Symbol
rpoH
Name
(GenBank) DNA-directed RNA polymerase sigma 32 subunit RpoH subfamily
KO
K03089
RNA polymerase sigma-32 factor
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wcl03021
]
WCLE_00220 (rpoH)
Transcription machinery [BR:
wcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WCLE_00220 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_6
SpoIIID
Sigma70_r4_2
HTH_28
KORA
MYO15
Motif
Other DBs
NCBI-ProteinID:
BAO99342
LinkDB
All DBs
Position
complement(28768..29661)
Genome browser
AA seq
297 aa
AA seq
DB search
MLIPTASLCVNSSTNLTQYIAEVRKFPMLSQEEEVRLAKNWHQYKDISSAHKLITSHLNL
VVKIAMKFKNYGLLLMDLVMEGNMGLMHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKS
WSFVKIGTTQAQRKLFFSLRKIKKRILRYTNRETLSNEEIKAISNELSVSEGDVVQMGYR
LACKDQSLNKCIKIGDDSKKELQDMIPCNSVSQEITYQNYEEKELKETILNNALANLNER
SRDIFVSRYLSENTQTLDELSKKYGVSRERIRQLAEQAMSKVRQHIQSESLKFGLHA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcccaacagcaagcttatgtgttaacagtagcactaatctcacgcagtatatt
gctgaagtgcgaaaatttcctatgctttcccaagaagaagaagtacgattagcaaaaaat
tggcaccaatataaagatatttcttccgctcataagttgattaccagtcatttgaatttg
gtagtgaaaattgcaatgaagttcaaaaactatgggctgctgcttatggatctggtcatg
gaaggaaacatgggtttaatgcatgcagtgaaaaagtttaatcctgatttagggtttcgc
ttttcaacttatgcagtgtggtggattgaagcttcaataaaagactttatattgaaatct
tggtcgtttgtaaaaataggcacaacacaggcgcaaagaaagctattttttagtttgcgt
aaaataaaaaaaagaattttgcgatatacaaacagagaaactttaagtaatgaggaaata
aaagcaatatccaatgaactttctgtatctgaaggagatgttgtacagatgggttaccgt
ttagcttgtaaggatcagtcgctaaataagtgtataaagataggtgatgactctaaaaag
gagttacaagatatgattccatgtaactcggttagtcaagaaataacttaccaaaattat
gaagagaaagaattaaaagaaacaattttaaacaatgcgctggcaaaccttaacgaaagg
tcaagagacatctttgtcagtagatatttgtctgaaaacactcaaactctagatgagctt
agtaaaaaatatggtgtttcaagagaaagaataagacagctagctgagcaggcgatgagt
aaggtaagacaacatatacaatcggagagtttaaaatttggcttgcatgcgtag
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