Wolbachia endosymbiont of Cimex lectularius: WCLE_002240
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Entry
WCLE_002240 CDS
T03628
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Pathway
wcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WCLE_002240 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wcl03021
]
WCLE_002240 (rpoA)
03400 DNA repair and recombination proteins [BR:
wcl03400
]
WCLE_002240 (rpoA)
Enzymes [BR:
wcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WCLE_002240 (rpoA)
Transcription machinery [BR:
wcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WCLE_002240 (rpoA)
DNA repair and recombination proteins [BR:
wcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WCLE_002240 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAO99541
UniProt:
A0A060PYZ4
LinkDB
All DBs
Position
228863..229930
Genome browser
AA seq
355 aa
AA seq
DB search
MYYNDSVSIFSNLDKLTRPNSMKVVPGDSSEKGDIVLEPLESGFALTLGNALRRVMLSSL
IGSAVYGIKIEGITHEFTSIQGVREDVTDIILNMSMLRCKLNGTSNKCLSLSAKGPCQVS
AGMIETDDQCSIVNKDLLICTLGQNVELNMTIYAASGKGYLPVAKYKENEFLKLMNEQDL
IGFIPVNALYSPVNRVSYKVENSRVGQVTDKNKLILSVETDGTISPSQAVDSAARILQEQ
LQPFISSDVSYKKSQASSSNGYRDLGYDPILLCKMDEMELSVRSHNCLKNENITYIGDLV
QRTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDVPNWPPKDIDELARQHTDED
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtattataacgatagtgtttctatttttagcaacttagataaattgactaggcctaat
tcaatgaaggtagtgccaggtgattcaagtgaaaaaggcgatatagtactggaaccattg
gagagtggttttgctttaacacttggtaatgcattaaggcgtgtgatgctatcttctctt
ataggtagtgctgtttatggaataaaaatcgagggcataactcatgagtttacttcaatt
caaggagtaagagaagatgtaactgatataatattaaatatgagtatgttgaggtgtaag
ttgaatggcacttccaataaatgcttgagtttaagtgctaaaggaccttgtcaggtatcg
gctgggatgatagaaactgatgatcagtgttctattgttaataaagatctgctgatatgt
acacttgggcagaatgtggagctcaacatgactatatatgcggctagtggaaaaggctac
cttcctgtcgctaaatataaggaaaacgaatttttgaagttaatgaatgagcaagatcta
atagggttcattccggttaatgctttatatagtcctgtcaatagagtttcatataaggtg
gagaatagtcgtgttggtcaagttactgataagaataagttgatattatcagttgagact
gatggtacaatttctccaagtcaagctgttgactctgctgcaaggatattacaggaacaa
cttcagccttttattagctctgacgtaagttataaaaaatcgcaggcttcctcatctaat
ggttatagggatttgggttacgaccctatcttattgtgcaaaatggacgagatggagctg
tctgttaggtcacataattgcttgaaaaatgaaaatatcacttatataggtgatcttgta
caaagaacagaaagtgaaatgctaagaactgctaattttggtagaaagtccttgaatgag
attaaggcagttttaaataatttcggcttgtctttgggtatggatgttccaaattggcca
cctaaagacatagatgaattggctagacaacatactgatgaagattag
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