Wolbachia endosymbiont of Cimex lectularius: WCLE_003140
Help
Entry
WCLE_003140 CDS
T03628
Symbol
rne
Name
(GenBank) ribonuclease G and E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Pathway
wcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCLE_003140 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wcl03019
]
WCLE_003140 (rne)
03009 Ribosome biogenesis [BR:
wcl03009
]
WCLE_003140 (rne)
Enzymes [BR:
wcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
WCLE_003140 (rne)
Messenger RNA biogenesis [BR:
wcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCLE_003140 (rne)
Ribosome biogenesis [BR:
wcl03009
]
Prokaryotic type
rRNA processing factors
WCLE_003140 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
VWA_N
Motif
Other DBs
NCBI-ProteinID:
BAO99629
LinkDB
All DBs
Position
complement(316321..318093)
Genome browser
AA seq
590 aa
AA seq
DB search
MANSGKRLLLIENSICSDEVRVALSVNNRVVEFEQEFKEKRQLRGNIYIAHVKRVEPSLQ
AVFIEYGKNKQGFLSFSEISPDYFNISEKEKEAFFESYSSGDCTEEGNGASANTSSDSTT
SRSVNESGNGFVREVSLYRRYKLQDVISVNQKILVQLTKEERGNKGASFTTYITLVGRYC
VFMPNSMSRGGVSRRIEDINVRKQLKDILNSIELPKRSGLIVRTVGSGKSKKEIEQDYNY
LSSLWQNIQENVSSVNVPSLIYNEADLIMKSIRDFCSNDVEVVISGKEAFETVRQYARNV
LKGSKLRYRLYRGFVPIFTYYGIEDQISELYSNRVKLPSGGSLIITLTEAFVSIDVNSGK
MTGEDSIEETAYRTNMEAAPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIRQAFK
DDKARVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGIGKVKSNEVIVASILRDLQ
YVAIRNRNRSFDLVAHGSIIAHIFNNKRDTVSTIEREFNIKLNVSADSNLSIDAFILKRG
DDVNLNDCKPLQNSGYKIETSNNERADNSGGLQSNFWLTKWLSRLLSSNS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagtggtaaaaggttactattaatagaaaattctatctgctctgatgaggtg
agagttgctttgtcagtaaataacagggttgtagagtttgaacaggaattcaaggaaaaa
aggcagttaagaggcaacatatatattgctcatgtaaagcgtgtagagccttctttgcaa
gctgtatttattgaatatgggaagaataagcaaggttttttatctttttctgaaatatct
ccagattactttaatatttcagaaaaggagaaagaagctttctttgaaagctattcaagt
ggtgattgtacggaggaaggtaacggtgcatcggcaaatacttcttcagattctacaact
agtaggagtgttaatgagtccggtaatggttttgtaagggaggtatctttatataggaga
tataaattacaagatgttatttcggtcaatcaaaaaatattggttcaactcactaaagag
gaacgaggtaataaaggggcttcatttacaacgtacataactttagtgggcaggtattgt
gttttcatgccaaattccatgagcaggggtggtgtgtcccgcagaatcgaagatattaac
gttagaaaacagttaaaggatatattgaattcaatagagttaccgaagaggtcaggttta
atagtaaggaccgttggttcgggaaaaagtaaaaaagaaattgagcaggattacaattat
ttatcttcgttatggcaaaatattcaagaaaatgtctcctctgtaaatgttccatcattg
atttataacgaagcagatctgattatgaaatctatccgtgatttctgtagcaatgatgtg
gaagttgtaatatctggaaaagaagcttttgaaacagtaaggcaatacgctagaaacgta
ttaaaaggtagtaagttgcggtataggttgtatagaggttttgttccgatatttacttac
tacggaatcgaagatcaaatttctgagttatatagcaatagagtgaaattgccatccggt
gggtctttgataataactttaactgaggcatttgtttcaatagatgtaaattcagggaaa
atgacgggggaagatagtatagaagaaacagcttacagaaccaatatggaagcagcgcct
gaaatatcaagacaggtaaatttaagaggcttatcagggttaatagtggtcgattttatt
gatatgttgaagtatcagtattgtagagctgttgaatctgctattaggcaagcgttcaag
gatgataaagctagagttcagttcagctacataaatgattttggtttaatggtgttttca
aggcagagaattaaaccaaacatacaggagattaacactacagagtgcctgcattgtaaa
ggaattggaaaagtaaaatcaaacgaagtaattgttgcatcaatactgagagacttgcaa
tacgttgctattaggaatcggaataggtcgtttgatttagtagcacatggttcaattata
gcacatatttttaataataagcgtgatacagtttctacaattgaaagagagtttaatatt
aaattaaacgttagcgctgatagcaatttgagtatagatgcattcattttaaaacgaggt
gatgacgttaatttaaatgattgtaagccattgcaaaactctggttacaaaattgagact
agtaacaatgaaagagctgataattcaggtggattgcaaagcaatttttggttaactaag
tggctttcacgtcttttgagctctaatagctaa
DBGET
integrated database retrieval system
